G1648381


Basic Information

Item Value
gene id G1648381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 64333866 ~ 64334962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886261
GTCGGTTTAGCATACAGTAACTGGGGTCTGTCTCAAAGTACAGCACATTCCACCATACTGGACGTGGAAATCAGGGCATTCATCTCTGAGCTAGGACGCAAAAGGCGACTGACTGACTTCTGTCTAAAGAAATACAATCAACGTTGCTATCAGACTTACTTTGACGTGCATGACTGTAAACTCACATCACTTCCTTGAACAGCGTTTTGTTCATTTCCCAAAAGGAGTTATTGTGAAATGTAGAGCCTTGTAGGAAGTGGCTGACTCACCTCTGAGTCTGAGGACATTGCTGAGTGTTGCAGGTGCGGTTGGTGAGGGGGCGTGGCAAGGCGGAGCACAGGTAGTCTGGGTAGGCCTCGTTATCGATGGCACAGAACACCAGACGAGACTGGTACCCTGGTGGAGGGACAGGATGAGGAATCAGTCCAGCAGGGATGGAAAAAGGTTAACTGTGTCCAAGGATACTTTGGTCAAAAACAAACAGCATTAACTATTGTTGAGTAGAACAAGAAGAGCAAGAAGAACAACAAGAAGAACAAAATAAAAAgaacaagaagaacaagaagaacaagaagagCAAGAAGAACAACAAGAAGAAAaacaagaagaacaagaagaacaagaagaacaagaagaacaagaagaacaagaagaaaaacaagaagaacaagaagaacaagaagaacaagaagaaaaataaaaagaacaagaagaacaagaagaacaagaagaagaagaacaagaagaacaagaagaacaagaagaacaagaacaagaacaaCAAGAACAACAAGAAAAATAAAAAGAACAAGAACTAGAAGAACaacaagaagaacaagaagaacaagaacaagaacaaCAAGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886261 True 866 lncRNA 0.41 3 64333866 64334962

Neighbor

gene id symbol gene type direction distance location
LOC118941526 NA coding upstream 113297 64215286 ~ 64220569 (+)
LOC118941525 NA coding upstream 118249 64202220 ~ 64215617 (+)
ccdc177 LOC106586969 coding upstream 132132 64193509 ~ 64201734 (+)
LOC110514319 rbm25 coding upstream 614856 63648369 ~ 63719010 (+)
plek2 plek2 coding upstream 768382 63557803 ~ 63565484 (+)
LOC118941371 NA coding downstream 146465 64481427 ~ 64482263 (+)
LOC118941527 ERH coding downstream 205323 64540285 ~ 64552914 (+)
LOC110498417 capn3 coding downstream 636273 64971235 ~ 65020599 (+)
wdr32 dcaf10 coding downstream 710449 65045411 ~ 65070228 (+)
LOC110498306 LOC106563190 coding downstream 742418 65077380 ~ 65103465 (+)
G1648378 NA non-coding upstream 6482 64324627 ~ 64327384 (+)
G1648376 NA non-coding upstream 13464 64319655 ~ 64320402 (+)
G1648336 NA non-coding upstream 54177 64277972 ~ 64279689 (+)
G1648343 NA non-coding upstream 79430 64253314 ~ 64254436 (+)
G1648310 LOC106591369 non-coding upstream 82873 64248809 ~ 64250993 (+)
G1648413 NA non-coding downstream 144982 64479944 ~ 64480429 (+)
G1648438 NA non-coding downstream 216543 64551505 ~ 64551982 (+)
G1648456 NA non-coding downstream 237724 64572686 ~ 64573087 (+)
G1648462 NA non-coding downstream 266102 64601064 ~ 64601552 (+)
G1648468 NA non-coding downstream 271043 64606005 ~ 64607841 (+)
G1648296 NA other upstream 204798 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 942034 63380908 ~ 63414582 (+)
G1647477 NA other upstream 1129809 63202756 ~ 63204057 (+)
G1647411 NA other upstream 1256723 63075149 ~ 63077143 (+)
G1647342 NA other upstream 1315178 63016955 ~ 63018688 (+)
G1648608 NA other downstream 645402 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1126811 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1209415 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1243477 65578439 ~ 65582582 (+)
G1649319 NA other downstream 1265998 65600960 ~ 65602416 (+)

Expression


Co-expression Network