G1648576


Basic Information

Item Value
gene id G1648576
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 64898001 ~ 64901507 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886508
CAGTCTACCTTAGTGGTATTCAGCGTGCTGTGGTGCAGTCTACCTTAGTGGTATTCAGAGTGCTGTGGTTCAGTCTACCTTAGTGGTATTCAGAGTGCTGTGGTTCAGTCTACCTTAGTGGTATTCAGCGTGCTGTGGTGCAGTCTACCTTAGTGGTATTCAGAGTGCTGTGGTTCAGTCTACCTTAGTGGTATTCAGAGTGCTGTGGTGCAGTCTACCTTAGTGGTATTCAGAGTGCTGTGGTGCAGTCTACCTTAGTGGTATTCAGAGTGCTGTGGTGCAGTCTACCTTAGTGGTATTCAGAGTGCTGTGGTTCAGTCTACCTTAGTGGTATTCAGCGTGCTGTGGTTCAGCCTACCTTAGCGGTATTCAGCTTGCTGTGGTGCAGCTCCAGCACGTGTAGAGCAGCCTTTAGATTGGCCTGTGGCTCCGACAGCTCCATTTTGATTGGTCCAAGGCAGTGGACATCAGGAGGGGACAAATACATGCGCAGCAGAGACaggtacacATctttgtttctgtctgtgtctttgtcaTAATGCCGGTGACAGTACCTGAAGGGAGAGAAACACAAAATGGCACTATTATAACTGACAATAACATCAGCAAAGACACCGCCTGGAGAGAAATCATAATGTAGATAGTTTAAAAAC

Function

NR:

description
PREDICTED: vam6/Vps39-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886508 True 653 lncRNA 0.47 2 64898001 64901507

Neighbor

gene id symbol gene type direction distance location
LOC118941527 ERH coding upstream 345087 64540285 ~ 64552914 (+)
LOC118941371 NA coding upstream 415738 64481427 ~ 64482263 (+)
LOC118941526 NA coding upstream 677432 64215286 ~ 64220569 (+)
LOC118941525 NA coding upstream 682384 64202220 ~ 64215617 (+)
ccdc177 LOC106586969 coding upstream 696267 64193509 ~ 64201734 (+)
LOC110498417 capn3 coding downstream 69728 64971235 ~ 65020599 (+)
wdr32 dcaf10 coding downstream 143904 65045411 ~ 65070228 (+)
LOC110498306 LOC106563190 coding downstream 175873 65077380 ~ 65103465 (+)
manba manba coding downstream 207178 65108685 ~ 65142820 (+)
nat8 LOC106607815 coding downstream 328177 65229684 ~ 65239437 (+)
G1648569 NA non-coding upstream 8173 64889058 ~ 64889828 (+)
G1648562 NA non-coding upstream 21984 64875131 ~ 64876017 (+)
G1648542 NA non-coding upstream 78226 64819309 ~ 64819775 (+)
G1648523 NA non-coding upstream 148230 64747450 ~ 64749771 (+)
G1648520 NA non-coding upstream 151734 64745742 ~ 64746267 (+)
G1648583 NA non-coding downstream 12975 64914482 ~ 64914805 (+)
G1648573 NA non-coding downstream 13632 64915139 ~ 64915624 (+)
G1648570 NA non-coding downstream 15867 64917374 ~ 64919109 (+)
G1648600 NA non-coding downstream 56413 64957920 ~ 64963940 (+)
G1648608 NA non-coding downstream 78857 64980364 ~ 64980943 (+)
G1648296 NA other upstream 768933 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 1506169 63380908 ~ 63414582 (+)
G1647477 NA other upstream 1693944 63202756 ~ 63204057 (+)
G1647411 NA other upstream 1820858 63075149 ~ 63077143 (+)
G1647342 NA other upstream 1879313 63016955 ~ 63018688 (+)
G1649268 NA other downstream 560266 65461773 ~ 65463454 (+)
G1649291 NA other downstream 642870 65544377 ~ 65545055 (+)
G1649309 NA other downstream 676932 65578439 ~ 65582582 (+)
G1649319 NA other downstream 699453 65600960 ~ 65602416 (+)

Expression


Co-expression Network