G1648620


Basic Information

Item Value
gene id G1648620
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65011234 ~ 65012750 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886579
tacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccagttaggctagttgagaacacctttatttaaccagttaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgaga

Function

NR:

description
PREDICTED: titin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886579 True 461 lncRNA 0.39 2 65011234 65012750

Neighbor

gene id symbol gene type direction distance location
LOC118941527 ERH coding upstream 458320 64540285 ~ 64552914 (+)
LOC118941371 NA coding upstream 528971 64481427 ~ 64482263 (+)
LOC118941526 NA coding upstream 790665 64215286 ~ 64220569 (+)
LOC118941525 NA coding upstream 795617 64202220 ~ 64215617 (+)
ccdc177 LOC106586969 coding upstream 809500 64193509 ~ 64201734 (+)
wdr32 dcaf10 coding downstream 32661 65045411 ~ 65070228 (+)
LOC110498306 LOC106563190 coding downstream 64630 65077380 ~ 65103465 (+)
manba manba coding downstream 95935 65108685 ~ 65142820 (+)
nat8 LOC106607815 coding downstream 216934 65229684 ~ 65239437 (+)
LOC118941380 NA coding downstream 228932 65241682 ~ 65244293 (+)
G1648608 NA non-coding upstream 30291 64980364 ~ 64980943 (+)
G1648600 NA non-coding upstream 47294 64957920 ~ 64963940 (+)
G1648570 NA non-coding upstream 92125 64917374 ~ 64919109 (+)
G1648573 NA non-coding upstream 95610 64915139 ~ 64915624 (+)
G1648583 NA non-coding upstream 96429 64914482 ~ 64914805 (+)
G1648605 NA non-coding downstream 9321 65022071 ~ 65023620 (+)
G1648623 NA non-coding downstream 11502 65024252 ~ 65027253 (+)
G1648626 NA non-coding downstream 27343 65040093 ~ 65040335 (+)
G1648627 NA non-coding downstream 29000 65041750 ~ 65042048 (+)
G1648636 NA non-coding downstream 47658 65060408 ~ 65060744 (+)
G1648296 NA other upstream 882166 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 1619402 63380908 ~ 63414582 (+)
G1647477 NA other upstream 1807177 63202756 ~ 63204057 (+)
G1647411 NA other upstream 1934091 63075149 ~ 63077143 (+)
G1649268 NA other downstream 449023 65461773 ~ 65463454 (+)
G1649291 NA other downstream 531627 65544377 ~ 65545055 (+)
G1649309 NA other downstream 565689 65578439 ~ 65582582 (+)
G1649319 NA other downstream 588210 65600960 ~ 65602416 (+)
LOC110498653 atrn other downstream 721864 65549526 ~ 65812816 (+)

Expression


Co-expression Network