G1648627


Basic Information

Item Value
gene id G1648627
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65041750 ~ 65042048 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886595
ctagtcactttaccctgccttcatgtacatatctacctcaaataccttattattatctatcctgatgactagtcactttaccctgccttcatgtacatatctacctctaatacctcattattatctatcctgatgactagtcactttaccctgccttcatgtacatatctacctcaaataccttattattatctatcctgatgtctagtcactttaccctgccttcatgtacatatctacctcaaataccttattattatctatcctgatgtctagtcactttaccctgccttcatgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886595 True 299 lncRNA 0.36 1 65041750 65042048

Neighbor

gene id symbol gene type direction distance location
LOC110498417 capn3 coding upstream 21151 64971235 ~ 65020599 (+)
LOC118941527 ERH coding upstream 488836 64540285 ~ 64552914 (+)
LOC118941371 NA coding upstream 559487 64481427 ~ 64482263 (+)
LOC118941526 NA coding upstream 821181 64215286 ~ 64220569 (+)
LOC118941525 NA coding upstream 826133 64202220 ~ 64215617 (+)
wdr32 dcaf10 coding downstream 3363 65045411 ~ 65070228 (+)
LOC110498306 LOC106563190 coding downstream 35332 65077380 ~ 65103465 (+)
manba manba coding downstream 66637 65108685 ~ 65142820 (+)
nat8 LOC106607815 coding downstream 187636 65229684 ~ 65239437 (+)
LOC118941380 NA coding downstream 199634 65241682 ~ 65244293 (+)
G1648626 NA non-coding upstream 1415 65040093 ~ 65040335 (+)
G1648623 NA non-coding upstream 14497 65024252 ~ 65027253 (+)
G1648605 NA non-coding upstream 18130 65022071 ~ 65023620 (+)
G1648620 NA non-coding upstream 29000 65011234 ~ 65012750 (+)
G1648608 NA non-coding upstream 60807 64980364 ~ 64980943 (+)
G1648636 NA non-coding downstream 18360 65060408 ~ 65060744 (+)
G1648645 NA non-coding downstream 46654 65088702 ~ 65089107 (+)
G1648648 NA non-coding downstream 65889 65107937 ~ 65108190 (+)
G1648649 NA non-coding downstream 78494 65120542 ~ 65120969 (+)
G1648654 NA non-coding downstream 93316 65135364 ~ 65135760 (+)
G1648296 NA other upstream 912682 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 1649918 63380908 ~ 63414582 (+)
G1647477 NA other upstream 1837693 63202756 ~ 63204057 (+)
G1647411 NA other upstream 1964607 63075149 ~ 63077143 (+)
G1649268 NA other downstream 419725 65461773 ~ 65463454 (+)
G1649291 NA other downstream 502329 65544377 ~ 65545055 (+)
G1649309 NA other downstream 536391 65578439 ~ 65582582 (+)
G1649319 NA other downstream 558912 65600960 ~ 65602416 (+)
LOC110498653 atrn other downstream 692566 65549526 ~ 65812816 (+)

Expression


Co-expression Network