G1648649


Basic Information

Item Value
gene id G1648649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65120542 ~ 65120969 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886619
ggtgtttatcagaccaggagacatcccatctgaggtgacagagtggtgtttatcagaccaggagacatcccatctgtggtgacagagtggtgtttatcagaccaggagacatcccatctgaggtgaaaggtgacagagctagagagatgtttatcagaccaggagacatcccgaaaatcagtcttgtCATGTaaacgtctgtagcgtctgaaccgTTTGGGAGCCCACTGTGGAGCATTAGATATTAAACCTTAGTCTGAAGGTAGCCcatacatatattatatatatttttaaatattttattttattcctaaAGAGTTcgtaaaattctaaatcaaattaGCAAAATGATCCATGTTATGACCATCTTAAACCAATATGTCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886619 True 386 lncRNA 0.40 2 65120542 65120969

Neighbor

gene id symbol gene type direction distance location
LOC110498306 LOC106563190 coding upstream 17077 65077380 ~ 65103465 (+)
wdr32 dcaf10 coding upstream 50314 65045411 ~ 65070228 (+)
LOC110498417 capn3 coding upstream 99943 64971235 ~ 65020599 (+)
LOC118941527 ERH coding upstream 567628 64540285 ~ 64552914 (+)
LOC118941371 NA coding upstream 638279 64481427 ~ 64482263 (+)
nat8 LOC106607815 coding downstream 108715 65229684 ~ 65239437 (+)
LOC118941380 NA coding downstream 120713 65241682 ~ 65244293 (+)
LOC110498315 LOC106606645 coding downstream 129110 65250079 ~ 65291091 (+)
LOC110498317 LOC106600683 coding downstream 394839 65515808 ~ 65526958 (+)
LOC110498653 atrn coding downstream 428557 65549526 ~ 65812816 (+)
G1648648 NA non-coding upstream 12352 65107937 ~ 65108190 (+)
G1648645 NA non-coding upstream 31435 65088702 ~ 65089107 (+)
G1648636 NA non-coding upstream 59798 65060408 ~ 65060744 (+)
G1648627 NA non-coding upstream 78494 65041750 ~ 65042048 (+)
G1648626 NA non-coding upstream 80207 65040093 ~ 65040335 (+)
G1648654 NA non-coding downstream 14395 65135364 ~ 65135760 (+)
G1648617 NA non-coding downstream 22665 65143634 ~ 65144145 (+)
G1648659 NA non-coding downstream 23753 65144722 ~ 65144947 (+)
G1648660 NA non-coding downstream 24034 65145003 ~ 65222933 (+)
G1648663 NA non-coding downstream 50068 65171037 ~ 65203698 (+)
G1648608 NA other upstream 139599 64980364 ~ 64980943 (+)
G1648296 NA other upstream 991474 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 1728710 63380908 ~ 63414582 (+)
G1647477 NA other upstream 1916485 63202756 ~ 63204057 (+)
G1647411 NA other upstream 2043399 63075149 ~ 63077143 (+)
G1649268 NA other downstream 340804 65461773 ~ 65463454 (+)
G1649291 NA other downstream 423408 65544377 ~ 65545055 (+)
G1649309 NA other downstream 457470 65578439 ~ 65582582 (+)
G1649319 NA other downstream 479991 65600960 ~ 65602416 (+)

Expression


Co-expression Network