G1648648


Basic Information

Item Value
gene id G1648648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65107937 ~ 65108190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886618
ACGCACCACACTGTAGTAAATGTTTTCTGCCAGTCACAAGATACCCTGTGTGTTAAAAGGTGTATTAGGGTGTGTTAAAGGTGTGTTAAAGAGGTGTATTTTGTGactttcatcaaatcaaattgtatttgtcacattctctgaatacaacaggtgtaggtagaccttacagtgaaattcttacttttcaagcccttaaccaacaatgcagttttaagaaaaataagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886618 True 229 lncRNA 0.36 2 65107937 65108190

Neighbor

gene id symbol gene type direction distance location
LOC110498306 LOC106563190 coding upstream 4472 65077380 ~ 65103465 (+)
wdr32 dcaf10 coding upstream 37709 65045411 ~ 65070228 (+)
LOC110498417 capn3 coding upstream 87338 64971235 ~ 65020599 (+)
LOC118941527 ERH coding upstream 555023 64540285 ~ 64552914 (+)
LOC118941371 NA coding upstream 625674 64481427 ~ 64482263 (+)
manba manba coding downstream 495 65108685 ~ 65142820 (+)
nat8 LOC106607815 coding downstream 121494 65229684 ~ 65239437 (+)
LOC118941380 NA coding downstream 133492 65241682 ~ 65244293 (+)
LOC110498315 LOC106606645 coding downstream 141889 65250079 ~ 65291091 (+)
LOC110498317 LOC106600683 coding downstream 407618 65515808 ~ 65526958 (+)
G1648645 NA non-coding upstream 18830 65088702 ~ 65089107 (+)
G1648636 NA non-coding upstream 47193 65060408 ~ 65060744 (+)
G1648627 NA non-coding upstream 65889 65041750 ~ 65042048 (+)
G1648626 NA non-coding upstream 67602 65040093 ~ 65040335 (+)
G1648623 NA non-coding upstream 80684 65024252 ~ 65027253 (+)
G1648649 NA non-coding downstream 12352 65120542 ~ 65120969 (+)
G1648654 NA non-coding downstream 27174 65135364 ~ 65135760 (+)
G1648617 NA non-coding downstream 35444 65143634 ~ 65144145 (+)
G1648659 NA non-coding downstream 36532 65144722 ~ 65144947 (+)
G1648660 NA non-coding downstream 36813 65145003 ~ 65222933 (+)
G1648608 NA other upstream 126994 64980364 ~ 64980943 (+)
G1648296 NA other upstream 978869 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 1716105 63380908 ~ 63414582 (+)
G1647477 NA other upstream 1903880 63202756 ~ 63204057 (+)
G1647411 NA other upstream 2030794 63075149 ~ 63077143 (+)
G1649268 NA other downstream 353583 65461773 ~ 65463454 (+)
G1649291 NA other downstream 436187 65544377 ~ 65545055 (+)
G1649309 NA other downstream 470249 65578439 ~ 65582582 (+)
G1649319 NA other downstream 492770 65600960 ~ 65602416 (+)
LOC110498653 atrn other downstream 626424 65549526 ~ 65812816 (+)

Expression


Co-expression Network