G1648654


Basic Information

Item Value
gene id G1648654
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65135364 ~ 65135760 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886624
ctgaaaccagattgcatagcggagaaggtatggtgggattcgaaatgatcggtaatctgtttgttgacttggctttcgaagaccttagaaaggcagggtagggtagatataggtctgtagcagtttgggtcaagagtgtccccccttttgaagagggggatgactgcagctgctttccaatctttgggttCTCCCCCAGATTTggtcactatgccagggttCTCCCCCAGATCTGGCcactatgccagggttctccccaaATAAGAGGGGTGCTGTGCCACCTTGTTGGCGTGGATGCGCCACTATGTAAAGATTTCACAGCAAATTAAACTGAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886624 True 335 lncRNA 0.49 2 65135364 65135760

Neighbor

gene id symbol gene type direction distance location
LOC110498306 LOC106563190 coding upstream 31899 65077380 ~ 65103465 (+)
wdr32 dcaf10 coding upstream 65136 65045411 ~ 65070228 (+)
LOC110498417 capn3 coding upstream 114765 64971235 ~ 65020599 (+)
LOC118941527 ERH coding upstream 582450 64540285 ~ 64552914 (+)
LOC118941371 NA coding upstream 653101 64481427 ~ 64482263 (+)
nat8 LOC106607815 coding downstream 93924 65229684 ~ 65239437 (+)
LOC118941380 NA coding downstream 105922 65241682 ~ 65244293 (+)
LOC110498315 LOC106606645 coding downstream 114319 65250079 ~ 65291091 (+)
LOC110498317 LOC106600683 coding downstream 380048 65515808 ~ 65526958 (+)
LOC110498653 atrn coding downstream 413766 65549526 ~ 65812816 (+)
G1648649 NA non-coding upstream 14395 65120542 ~ 65120969 (+)
G1648648 NA non-coding upstream 27174 65107937 ~ 65108190 (+)
G1648645 NA non-coding upstream 46257 65088702 ~ 65089107 (+)
G1648636 NA non-coding upstream 74620 65060408 ~ 65060744 (+)
G1648627 NA non-coding upstream 93316 65041750 ~ 65042048 (+)
G1648617 NA non-coding downstream 7874 65143634 ~ 65144145 (+)
G1648659 NA non-coding downstream 8962 65144722 ~ 65144947 (+)
G1648660 NA non-coding downstream 9243 65145003 ~ 65222933 (+)
G1648663 NA non-coding downstream 35277 65171037 ~ 65203698 (+)
G1648666 NA non-coding downstream 38360 65174120 ~ 65178995 (+)
G1648608 NA other upstream 154421 64980364 ~ 64980943 (+)
G1648296 NA other upstream 1006296 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 1743532 63380908 ~ 63414582 (+)
G1647477 NA other upstream 1931307 63202756 ~ 63204057 (+)
G1647411 NA other upstream 2058221 63075149 ~ 63077143 (+)
G1649268 NA other downstream 326013 65461773 ~ 65463454 (+)
G1649291 NA other downstream 408617 65544377 ~ 65545055 (+)
G1649309 NA other downstream 442679 65578439 ~ 65582582 (+)
G1649319 NA other downstream 465200 65600960 ~ 65602416 (+)

Expression


Co-expression Network