XLOC_036082 (CABZ01079663.1)


Basic Information

Item Value
gene id XLOC_036082
gene name CABZ01079663.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 54013199 ~ 54025857 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070612
ATGATGGACTCTCCAGATATTCTTCATTCGGACGCTCAGCTCTCGCTCTCAGACAGACTCTCCTGCACACCGGCAGAGATTTCAGGACTGCCAGACGCTGTGCAgtgcagcaaacacacacaggagAGCAGCGAACACACACCCATGCAGCAGGACGTCCCGCCGGAGGCTGACGGAGAGACCAGCGGGAAGATCCCCAACCGGGACAGCGGGATCGACAGTCCGTCCTGCGGCGGAGAGGGAGAGTGTTTCCCCAATGAGGAGCACAAACAGGAATACACACACGAGGAAGACAAACGAGAACACACACATGATGTGGACAAACAGGAACACACACACGAGGAGCGCAAACGAGAATACACACATGATGAGGACAAACGAGAATACACACATGAGGAGGACAgcgatctggaggaagaagagcaggaggaagaggaggaggaccAGAACACAGAGATcaagGCTTCGGTGTGTGACCCTCAGAAGCTGCTGAACATCGCTAAAGAGCTGCTGCAGACAGAAGAGGCCTACGTGAAGAGGCTGAACCTGCTGGAccaggtgttcTGTGCGCGTCTGACGGAGGCTGGTATTCCCACTGATGTGATCACTGGAATCTTCTCCAACATCTCCTGCATCCACCatatatacacacactcacagataccacacacacacacacacacagtgacacgtacgagctGTAACCCGCGCATCGGGGACATCCTCCAGAAGCTGGCTCCGTTCCTGAAGATGTACGGCGAGTACGTGAAGAACTTCGACCGCTCGATGGAGCTGGTCAGCCTGTGGACACAGCGCTCCGGGACATTCAAGAGCACCGTGCAGAGCATacagaagcaGGAGGTGTGTGGGAACCTGACGTTGCAGCACCACATGCTGGAGCCGGTGCAGAGGATCCCGCGCTACGAGCTGCTGCTGAAGGACTACCTGAAGAAACTGCCGGAGGGAGCAGCAGACCACCGAGACGCTCAgaatgctCTAGAGCTGATCTCCACCGCTGCCAATCACTCCAATGCTGCCATCAGGAAGATGGTGAGACACCGATTGTGCTTGCATGttctagctgtCCTCTTTCTAGAGCTGCCGCCTTCTGCTGTTCTGATCTGTCCAGGTTACCCTGTCAATATTCAGTGTAGGGGGGACCCCACATTTTGCTCTACGCCACTGCTCAGttctGTTTGTCTTCTGTTTTGCATTTTTTGTGTTGCTCTTTGCATGAAAAAAGTTTGCACAAGACAACGTAAAAACCGCACTGTGATGCATGTCAAAGAACGTGTGAAATTGCGTCCTCCACATTTgtttaccctaattaccctagtgaagcctttacatgtcactgtaagGACGGCAGAGGAGAGGGACGACTGGATCAAGGTGATTCTGGGAAGATTTGCAGGAAGAAGAGGAAATAAACTGTACTTTACATCATTTATCCATTCATTTAATCTGAGAGAATCCGAGTTTAATCTTGCTCCAAAACTGGAGAGTTCAGCTGCAGTTCAACAGAGTTTGTCAGATAATGAAGGAAATGAAACGAAGACTGACCGGCAAATAATTCAGTCTTCAACAGTGTTTATGAGCTGTTTGGAAGCTTTTAAAACCAGACTGAAAAgtgtgtgtgtgtgtgtgcaggctgtCTGTGGGAAGTGCCTGAAGGTGTGTGACAGCAGGAACATTCGCATGTGTAGACCGTGTGCTGAAGCTGAAGGAGCAGCAGGAGGCGCCACTGAGCACAAGAAGAGGGTCGAGaagcAGCTGTCGGTTAGTCAACTGTCATCTTCTCAGCGGTCTGGAAAAGGTGAAGAGGTTGAGCAGGAGCAGATCCTCCATCGTTGA
>TCONS_00072315
tgtgtgtgtgtgcaggctgtCTGTGGGAAGTGCCTGAAGGTGTGTGACAGCAGGAACATTCGCATGTGTAGACCGTGTGCTGAAGCTGAAGGAGCAGCAGGAGGCGCCACTGAGCACAAGAAGAGGGTCGAGGTGAAACACacacatcatacacacacacacaaacacataacatacacacagacactgacacaaacacaaaGGCTGACACTCACACAAATGCAAGGCAAAAACACAgacatcagacacacacacacacacacaaacacacgcacaaaccctcaaacactgacacacacacattcattcattttccttgagcttaatcccttatttatcaggggtcgccacagcggaatgaactgccaactattccagcatgttttacacagcggatgccctttcagtcacaacccagtactgggaaacacccatacacactcattcacacacacactcatacactacgaccagtttagttgatcaattcccctatagcgcatgtgtttggactgtgggggaacatgcaaactccacacagaaacacccttGATTTAATTTGAGTTTATTTAGCTAATTAATACACTATTTAGTTATATTTTGattggtttttaatttttatttttataattcagttttttataTAGACCGGGTCATaaatacaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttcagaagcAGCTGTCGGTTAGTCAACTGTCATCTTCTCAGCGGTCTGGAAAAGGTGAAGAGGTTGAGCAGGAGCAGATCCTCCATCGTTGACCAGCACacgggtgagtgtgtgtgtgtgtgtgtgtgagcgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtatgtgtataagtgtgtgtgattaGGGTCAGGTGGATTTGTGTGACCCAATGTTGACCTCAGAGAGTCTGTCTTCTGCAGTGATgagtcttgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgtgttcagtgtcttttcttttttttctactgtCTCAAAAGTTAGACATTTCACCTCCATCTCCACCACTGAATAAAGCAGCTATGTTTCGCATGAGTAATGAAATAATCTGCATTGATGTGTGGATTGTGAGGACTCGGCAGTATTTCACTGAGATACGATTATTAAAGTTTTCATATACTAatatcaatatattttggtgcatgtaGACAAACGTTTCATTCATCAGTTACTGTATATCCCTTAAAACGAGAGTTTGCTCACCGAACATCTTCAGGAAtagtaatttaatacatttacattcaaaccagttaacgagcagctggacaggtgtacctaataaagtggccggtgaatataCCTGCACAAATAAATCCCTGTAAAGAATCATACTGTAAGGAAATATAACTGttaaagagagatctgtgatgGTTACactatttgtgtatatatgtatgtatgtgtgtttatttatttaaatatttccgtGTATGAGCTGTAATCTGTGTGTGTATCGTCAGGTCTGTGTGTTCATGCTCTTCGTCTGTCAGGATTCTCAGCCAGCAGCCGATTGGACAACGCTCCTGTCACATGCTGTATGGGGAGGAGCCTACGAGGTGTCAGCTACAGGATGTTTCCCCTGGGCTCTGGCCCCGCCCCTTTTATAAGGAACTCCTGTTACTTGAAATCACTTTATCCTCAGCACTTTCACTCTCTCTGTTGATGATCGGTTCACTGCCtgcttacagacacacacacacacatgcatacacatagacaaagacacacagaggaacacacatacacacacacacacacacatatatacagagaCAGACATACCCAAACAGATACAATCAAACAAACTCACACACAGaatcacacaatcacacacacacatgcatatacagtacatagacacacacacacacacacacacacacacatgcacacgctgGATGCTGAAATGAATGATATTGAAGGCTCATCatgaatgtttgtttgtgttggtgGTCTTTCAGGTGTGTTATAATCAGTTTATTAAGCATTAAGTCTCTGTCctgtcacactcacacacacaccgtcaGCACTGATGGATCTCAGATTTTAGTGCCACTCTGAGTCTCTTTGTTTATGTTCAGCGTTATGTTATGCAAATGAAGCACAATCGCTCGTGGCCATACTGAAGAAGACATGTTGTGCTGTGTGTTTACACCCCAGTAGCATTAGATCTGCCGCTTTTCTGTAATTAATGTAAAGTTTTACCATATCTACAATAGCTCACAGCTCAGCGCAGACATCAATAATGTCACACAGcctcttaaaggcacagtacacCCCAGAATATCATCAGAAACACCAAACAGCACTTCCCGGAgactaattaaaaacataaaatactatgaaagtccaGTGTTTCATCAGAATATCTGCATTAGCTTTGACACAAGTGTGTGAAGGATATTTGtgggtgtactgtctctttaagagtaaCGAGCTTCAGCTTTATTTATGCAATAACTGTCCTCTTCTGAAGAGAAGCGCTGTAGTTTTCTCAGGATGGTCTTTTCAGGTGTGTGTTTTGGgggatgtacagtatgtgtgtgtgtgcggatcATTATTGTCAGTGTTTTAGGATGATGGAGAGCTGTGGCGGGCCACTCAGTAGCACCTCCGACTGCTGGATATTTGCCTCCTGAGAGAAATGATGAGACTTTTCAGAGCGGATGATGCTCTTTTCTCTCAGTCTGGAGGAGGACTGTGCCCGATGTGATGTAAATCTTGCATTTGCTTGGCTTTTTTGTTTCTGAAAGCTTACAATCAGTATTATTGGAAGCTTTTTATGTGTACAAAGTCAATATCAGTCAATTAAAGAGTATCTGGTCAGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099650

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070612 False 1854 mRNA 0.51 21 54013199 54023774
TCONS_00072315 True 2896 lncRNA 0.42 1 54022962 54025857

Neighbor

gene id symbol gene type direction distance location
XLOC_036081 MMP23B coding upstream 67165 53928472 ~ 53946034 (+)
XLOC_036080 NA coding upstream 116208 53896086 ~ 53896991 (+)
XLOC_036079 CACNA2D3 coding upstream 348088 53563949 ~ 53665111 (+)
XLOC_036078 CU638702.1 coding upstream 514897 53496201 ~ 53498302 (+)
XLOC_036077 cacna1db coding upstream 548182 53464216 ~ 53465017 (+)
XLOC_036083 CABZ01066578.1 coding downstream 1825 54027682 ~ 54034515 (+)
XLOC_036084 magi1a coding downstream 29533 54055390 ~ 54072665 (+)
XLOC_036085 prickle2a coding downstream 55962 54081819 ~ 54105734 (+)
XLOC_036086 NA coding downstream 88179 54114036 ~ 54134106 (+)
XLOC_036087 brpf1 coding downstream 109785 54135642 ~ 54155096 (+)
XLOC_036070 NA non-coding upstream 861106 53143211 ~ 53152093 (+)
XLOC_036065 dre-mir-181b-2 non-coding upstream 989435 53023679 ~ 53023764 (+)
XLOC_036064 dre-mir-181a-2 non-coding upstream 989582 53023539 ~ 53023617 (+)
XLOC_036088 NA non-coding downstream 135283 54161140 ~ 54163747 (+)

Expression


Co-expression Network