trnak-cuu-149


Basic Information

Item Value
gene id trnak-cuu-149
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 42544384 ~ 42544456 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnak-cuu-149
Gcccggctagctcagtcggtagagcatgagactcttaatctcagggtcgtgggttcgagccccacgttgggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnak-cuu-149 True 73 mRNA 0.62 1 42544384 42544456

Neighbor

gene id symbol gene type direction distance location
LOC110500464 NA coding upstream 61854 42473267 ~ 42482530 (+)
si:ch211-1o7.2 ankrd53 coding upstream 133555 42407650 ~ 42410829 (+)
si:dkey-185m8.2 LOC106608874 coding upstream 174145 42354556 ~ 42370239 (+)
cxcl8c cxcl8c coding upstream 257522 42285056 ~ 42288500 (+)
LOC110500456 LOC106608882 coding upstream 323760 42213444 ~ 42220624 (+)
trnan-guu-198 NA coding downstream 2611 42547067 ~ 42547140 (+)
LOC110500468 LOC106608867 coding downstream 24776 42569232 ~ 42586213 (+)
faah2b LOC106608863 coding downstream 88937 42633393 ~ 42641281 (+)
c21h4orf48 cssa07h4orf48 coding downstream 110905 42655361 ~ 42661164 (+)
LOC110500846 nat8l coding downstream 132489 42676945 ~ 42692054 (+)
G1739788 NA non-coding upstream 36197 42507949 ~ 42508187 (+)
G1739438 NA non-coding upstream 47160 42496955 ~ 42497224 (+)
G1739434 NA non-coding upstream 52579 42491438 ~ 42491805 (+)
G1739430 vax2 non-coding upstream 64218 42479741 ~ 42480166 (+)
G1739831 NA non-coding downstream 38077 42582533 ~ 42584132 (+)
G1739836 NA non-coding downstream 48530 42592986 ~ 42599053 (+)
G1739867 NA non-coding downstream 148039 42692495 ~ 42694785 (+)
G1739440 vax2 other upstream 42027 42501349 ~ 42502357 (+)
G1739103 NA other upstream 646528 41888811 ~ 41897856 (+)
G1738119 NA other upstream 1515248 41024710 ~ 41029136 (+)
G1740312 r1441 other downstream 711197 43255653 ~ 43327738 (+)
LOC110500499 ubil other downstream 722758 43267057 ~ 43268143 (+)
G1740366 LOC106608832 other downstream 844733 43389189 ~ 43390299 (+)
G1740398 NA other downstream 902594 43447050 ~ 43451167 (+)
G1740412 LOC106608825 other downstream 925362 43469818 ~ 43470325 (+)

Expression


Co-expression Network