XLOC_036366 (zgc:77486)


Basic Information

Item Value
gene id XLOC_036366
gene name zgc:77486
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 19268474 ~ 19280856 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071080
ATGATTAgtgttataaatgttttttttttatttaaaatctacCACAGAATGGCAGACAATGTGAAAACAGCAGAGAAGGACAAAGAGGACTCACAGGAACAACAGAGTGTGATCTCCCGAGTGGGAAACCTGCCTCTGGTGAGTTCTGCGTGTGGCGCGGTGTATAATGCATACAGCAGCACTAAAGACAGCGTTCCCCTCCTAAAAGGAGTAATGGAGGTGGCAGAGAGCGGTGTCCGCACACTGGGTGCTGCTGCTTCAACAGGCTCCAAACCCATACTAGACCGACTGGAACCTCAGATTGCAGCTGTAAATGAATATGCTATAAAAGGGCTGGAGAAAGTGGAAGGAAACCTACCAATTTTACAACAGCCAGCAGACAAGCTGGTATCCGACACAGTGGGCATGGTGTACCAGTCGGTAACAGGAGCGAAGGATGCTGTGGTGGGGGCTGTGATGGAGGGTGTGGAGAAGACACGTATGGCTGTGACTGGGGGCATAAACACCGTCATGGGGTCCCGTGTGGGCCAGATGGTCAGTAATGGTGTAGATAAGGCTCTCACTCACTCTGAAGATTGGGTCGAGCAGAACCTTCCAATCAGTGAAAAGGAGCTTGCTACGCTTGCTGAGCCAAGGCCAGGGGAGGAGGAAGGATTCATAGTGTCCACTCGTTCCAGCTACTTTGTCCGTCTGGGTAAACTGTCTGCCAAAGTTCGAGAGAGGGCGCTTGAGCAGTCCCTCCTTAGGGCCCGCAAGGCCAGAGACACTACACATGCGTCTGTGACTCAAATGACCAGCACTATGGACCTGCTGGAAAGTGCCCGGGTTACCTTGACCAGTGCCAATCAGCAGCTAGCAGGGGCTCCAGAGCAGCTGCTTCAGCGATGGAAAGAGTGGAAAGAAGGACAGCCCAAAGAACTGCAGGAAAAAGTAACAGCAGAGACAGAAGCGGACGGAGCAAAAGACAAAGAACAGGAGATGGAGTCGAAAGCCCTGTTGATGGTGCGTGGTTTGAGTGATCAGCTGAAGACGGCGTGTTCAGGGGTCGTGTCCAGTGTTCAGGGTCTTCCAGGCACTGTGCAGGAACAGCTTCTCAATGCTCGACGTACAGCTGGAGAACTACAGGCATCGCTGAGCGGCACCAAGACCCTCACACCCGTCCTCTTACTGCAGACACGCCAGCAGATTGGCCAGGTACGGCAGTCTCTTGATGGAGTCGTGGAGTATCTACTCAATAACACTCCTCTGAATTGGCTGGTTGGGCCTTTTGCGCCTCAGATAACAGAGAAAGGTGAATGAAATTGCCACACAACCTAAATAAATCTGATGTTATGATATAATAGGTTAATATATGGTGCAAATTATTGTTTAACTACTTCTGTTTCAAATTTGTTGTTTACTGGAGTCACTACTAGACAGGTAAATTGGTTTTACCAAAATTGGTATGACAGTATAATGAAGTGAAAATTGCACATTTGTATCATTTCCTATTAAAATTGTCAGTATTTGAAAGCAAGTGTTATAACACAacagaatataaatatttaatgctGAATGTACTTTCTAAAAAAAAGCAAGCCATACtttatagttgttgttttgtaattcttaatattcatattttaaaagaaGTCTGTTGTTATCTGACATATAAAATAAATCGATggtttaaataaacactttttgtCCGAGAATGCATTTGTTTTGTATCTTGTTTTTGGACACAGGATTCTATGAAGaagttatattttataattaaccATTTTAGTATATTTGAGGTAATATGTTTTCAATATGGGGCGTCacagtagcgcagtgggtagcatgttggcctcatagcaagaaattcactggttcaagccttggatgggtcaattggcatttctgtgtggagtttgcatgttcacgccggtttcctccaggtgctccggtttcccccacatacatgcagtacaggtgaattgggtaagctaaattgtctgtagtgtatatgtgtgaatgagtgtgtatggatgtttcccagtgttgggttgcagctggaaggacatccgctgcgtaaaacatatgctggataagttggcggtttaataaagggtctaagccaaaaagaatatgaatgtTTTCAAAATTTCATATCAAGGCTcaaaccttgttgctgtgaggtgacagcactaccttctgcgccaccgaatagttcaaccaaaacacAATACTTCCAAATCTGTTTAACtttcgttcttctgttgaacaaaaaagaagatattttgaagaaagctggaaacctgtgtAACATGACTTCTATGTCAAAGGTTttttctactatagaagtcatgattacaggtttttagctttcttcaaaacatctcccttagtgttcaacagaagaacgaactcataaaggtttggaatcacttgagagtgagtaacttttcacttttgggtgaggTATCCTTTTAATTATTATCtatgtattgtaattttttttttgagtagtttatttataaatcattcacaaaattaattaacattttatttctaaaaatccTAAAAGTATTCCCCCAACCCCTCTCTGCTGATTGTATTTTCTAGTTTATGATGGGATTCACAAGTCAACTAAATAAAGTTAACCTGCTTCATCCAGTGTTTTGATCATTTGGAATTGGAATGTCTTTATTGTCCCCGAAGGGCAATTAGGTTTACAGCAATAGCCGGCTGTTAACAGCAACAGGTCACACTTGAACAACATAGAAGTGACAGTAAAGAATATAATTAATCATAATcaaaatttttaaaacagtggAAATCAACATCCTTCTTAGTCTGGAGGGAATTTGGTTGGAAAAACATCATTAGTTTTTTCGTCACCCCTGAGCAGAAGAGATACTTAAACAAAAAGGCAGTCTGCTGGAGACTATGTGGCTCAAATGAAGCAAATCATTCACATATTTTctggaaatttttaaaaatccaggCATTTTGGCAGGAAATTCTAAAATGTTTAGAGAATATATTCCATATCCCCATCGATTTTTCTTTCTCAACTCTCTATCTCTAGGCCTAAAAAATCCTATGTTAGAAGAAAAATCTGACAAAAACTGCTGAAAATTTTGCTGATAGCCTGTAAAAAAGCCATAACCAAAAAATGGTTACACCTCGAGAAACCTAAAATTGTTGACTGGTTTGACATAATTTATGAAATCTTTAAGATAGAGAGGCTAACAATAAACCGTCGTTTACAGACTGAGGAGTTTaatgagaaatggagaaaatggGTAGAATATATTCTTCCATTAGACCAGATTAATTAAAGAATGATTGACCAGTCAGaaaaatttgaattttattttgtttattttgtgtattattttttgtagTGAGAGAAAACATAACAGTAAGATAGCGAGAAGAACAatacctatttaaaaaaaaacccaaataaattaatattttacatttaagatcCTAAATGTACCATCCTCATAGTTCCATATGTACAtagattataaaaataaagaaagaaaagggTAGACGGTGCCACAATATGGTTGTAAAAAAGTACACAATTGAAATGTAACTGAAAAGCAACAAATCTGTTTCTTTTTGATGATATACACAACAATTATGAGTGTATTGATTTTTCTTGTTTCTTATAATGTGCTTAAATCATTAATGTAACTTCCGTATTTATTAATGgaattttttggtattttataatttcatttatttctacAATTTTGGGAATGCGATGTTTGATTGTTTTGTAAATACATTGTGGAAATGCCTATCTGTCTGTGGATTtgaaaactgcaataaaaactaaatggaaaaaacaactaaaaaagaaaaatgaatcactatcaagtaaaaataaacacacaacctAAAGCTTGGAACAAATAAACAACTGGAACAAATGAATGCAAATATCTGTTGGACCTTGCTCGTCTGAAATAAGTATTACTTCTACCTGATGGTAGGAGGCAAATCTTTGAATAAAGTGTACGGTTCTCATCTGCTAAAATTGATATTACCCTCTTTATGACTCTCACCTCATACACCTGTCCAATGCTGTTAAGATTTG
>TCONS_00071081
ATCAGAGATTCCCACATCCACTACACGCGGGTCAGCGGATCAATAACAGAATGGCAGACAATGTGAAAACAGCAGAGAAGGACAAAGAGGACTCACAGGAACAACAGAGTGTGATCTCCCGAGTGGGAAACCTGCCTCTGGTGAGTTCTGCGTGTGGCGCGGTGTATAATGCATACAGCAGCACTAAAGACAGCGTTCCCCTCCTAAAAGGAGTAATGGAGGTGGCAGAGAGCGGTGTCCGCACACTGGGTGCTGCTGCTTCAACAGGCTCCAAACCCATACTAGACCGACTGGAACCTCAGATTGCAGCTGTAAATGAATATGCTATAAAAGGGCTGGAGAAAGTGGAAGGAAACCTACCAATTTTACAACAGCCAGCAGACAAGCTGGTATCCGACACAGTGGGCATGGTGTACCAGTCGGTAACAGGAGCGAAGGATGCTGTGGTGGGGGCTGTGATGGAGGGTGTGGAGAAGACACGTATGGCTGTGACTGGGGGCATAAACACCGTCATGGGGTCCCGTGTGGGCCAGATGGTCAGTAATGGTGTAGATAAGGCTCTCACTCACTCTGAAGATTGGGTCGAGCAGAACCTTCCAATCAGTGAAAAGGAGCTTGCTACGCTTGCTGAGCCAAGGCCAGGGGAGGAGGAAGGATTCATAGTGTCCACTCGTTCCAGCTACTTTGTCCGTCTGGGTAAACTGTCTGCCAAAGTTCGAGAGAGGGCGCTTGAGCAGTCCCTCCTTAGGGCCCGCAAGGCCAGAGACACTACACATGCGTCTGTGACTCAAATGACCAGCACTATGGACCTGCTGGAAAGTGCCCGGGTTACCTTGACCAGTGCCAATCAGCAGCTAGCAGGGGCTCCAGAGCAGCTGCTTCAGCGATGGAAAGAGTGGAAAGAAGGACAGCCCAAAGAACTGCAGGAAAAAGTAACAGCAGAGACAGAAGCGGACGGAGCAAAAGACAAAGAACAGGAGATGGAGTCGAAAGCCCTGTTGATGGTGCGTGGTTTGAGTGATCAGCTGAAGACGGCGTGTTCAGGGGTCGTGTCCAGTGTTCAGGGTCTTCCAGGCACTGTGCAGGAACAGCTTCTCAATGCTCGACGTACAGCTGGAGAACTACAGGCATCGCTGAGCGGCACCAAGACCCTCACACCCGTCCTCTTACTGCAGACACGCCAGCAGATTGGCCAGGTACGGCAGTCTCTTGATGGAGTCGTGGAGTATCTACTCAATAACACTCCTCTGAATTGGCTGGTTGGGCCTTTTGCGCCTCAGATAACAGAGAAAGGTGAATGAAATTGCCACACAACCTAAATAAATCTGATGTTATGATATAATAGGTTAATATATGGTGCAAATTATTGTTTAACTACTTCTGTTTCAAATTTGTTGTTTACTGGAGTCACTACTAGACAGGTAAATTGGTTTTACCAAAATTGGTATGACAGTATAATGAAGTGAAAATTGCACATTTGTATCATTTCCTATTAAAATTGTCAGTATTTGAAAGCAAGTGTTATAACACAacagaatataaatatttaatgctGAATGTACTTTCTAAAAAAAAGCAAGCCATACtttatagttgttgttttgtaattcttaatattcatattttaaaagaaGTCTGTTGTTATCTGACATATAAAATAAATCGATggtttaaataaacactttttgtCCGAGAA

Function

symbol description
zgc:77486 Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in lipid storage and positive regulation of sequestering of triglyceride. Predicted to be active in cytosol and lipid droplet.

GO:

id name namespace
GO:0010890 positive regulation of sequestering of triglyceride biological_process
GO:0019915 lipid storage biological_process
GO:0005811 lipid droplet cellular_component
GO:0005829 cytosol cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2056 Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in lipid storage and positive regulation of sequestering of triglyceride. Predicted to be active in cytosol and lipid droplet.

Ensembl:

ensembl_id ENSDARG00000013711

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071080 False 4081 mRNA 0.38 7 19268474 19279784
TCONS_00071081 True 1696 mRNA 0.47 8 19270861 19280856

Neighbor

gene id symbol gene type direction distance location
XLOC_036365 zgc:77486 coding downstream 2061 19253205 ~ 19266413 (-)
XLOC_036364 abhd17ab coding downstream 22132 19232238 ~ 19246342 (-)
XLOC_036363 si:ch73-222f22.2 coding downstream 51790 19213867 ~ 19216684 (-)
XLOC_036362 sema6bb coding downstream 216568 18936603 ~ 19051906 (-)
XLOC_036361 rorca coding downstream 369047 18885108 ~ 18899427 (-)
XLOC_036367 rgl1 coding upstream 2287 19283143 ~ 19342111 (-)
XLOC_036368 colgalt2 coding upstream 83712 19364568 ~ 19395110 (-)
XLOC_036369 zgc:92140 coding upstream 117479 19398335 ~ 19467011 (-)
XLOC_036370 edem3 coding upstream 188822 19469678 ~ 19487327 (-)
XLOC_036371 fam78bb coding upstream 361343 19642199 ~ 19649617 (-)
XLOC_036359 NA non-coding downstream 495465 18771607 ~ 18773009 (-)
XLOC_036356 NA non-coding downstream 669118 18594067 ~ 18599356 (-)
XLOC_036355 AL844185.2 non-coding downstream 683667 18584693 ~ 18584807 (-)
XLOC_036336 NA non-coding downstream 1483563 17777860 ~ 17784911 (-)
XLOC_036335 NA non-coding downstream 1607280 17659597 ~ 17661194 (-)
XLOC_036374 NA non-coding upstream 704986 19985842 ~ 19989233 (-)
XLOC_036380 NA non-coding upstream 1126797 20407653 ~ 20413849 (-)
XLOC_036381 BX511253.2 non-coding upstream 1133990 20414846 ~ 20414961 (-)
XLOC_036382 BX511253.1 non-coding upstream 1167265 20448121 ~ 20455202 (-)
XLOC_036384 BX004774.1 non-coding upstream 1561278 20842134 ~ 20844502 (-)

Expression


Co-expression Network