XLOC_036775 (acsl2)


Basic Information

Item Value
gene id XLOC_036775
gene name acsl2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 50840565 ~ 50888806 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071799
AAAATTTCTTCTGATGTaccaattattacatttaatatgaGTAATTTCCAGCCCTCCAATAGCTAATTAACAAAACTTACGTGACATGCAAATCATTTCCCGGTTACAATTACAAAATaaggaaacaaataaacaaaatgttgatTTAAGCGTATGAACGAGGAAGTATAGTGAATAGTGTGAGAGGTTTGTTAAGGTTTGTCCCAGGACAGGCTGACGCTGGAGGGGGAGCGAGGGCGTGTTTGTGAGGGACTGAACACTGGCTCTGGGGTCCCGCGGGGATTTACTGCAGTCTGAGGAGAATAGAGGAACTTTTGGAGGACGGGTGACCCAgatttcacacactcacacagGTATGCAGTTTCAGGAGTGGTTAAGATCCCTGCGCTTCCATGGAGGAGATGGGAAGTCTGAACTGGACAATCTGAAGACTCTCATTCCGTCTCTGCCCTCGTCCTTCTCTctatcctctctctctctctctccgtcctCCATCATCGGCTTAGGAGCTCTGGCTTCTCTCACTACCTACTGGCTGGTCACTAGACCGAGACCAATACAGCCTCCCTGTGACCTACAGGCCCAGTCAATACCTGTGCAGggaGACCAAAGCTGCAGACGCTCAGCTTTACTGAAGGACGACACTCTGCTGGACTTTTACTATGAGGACACAAAGACAGCGTACGACATGTTCCAGAGAGGACTGCGGATAGCAGGTGATGGCCCGTGTCTGGGCTTCAGGAAACCTAGAGAGCCCTATCAGTGGATCTCTTACACAGAGGTGGCAGAGCGGGCACAGGTGCTGGGATCAGGATTACTGGCGAAGGGCTGCAAACCAAACCCACAGCAGTATGTGGGCATCTATGCACAAAACAGACCTGAGTGGGTCATTGCAGAGCTGGCCTGCTACACCTTCTCCATGGCTCTGGTGCCACTGTATGACACACTGGGGATTGAGGCCATGGTTCACATCCTTAACCTGGCTGAGATCTCGATGGTGATCTGTGATAAGGAGGATAAAGCGGAGTCTCTGCTGAGGAATAAGGAGAAGGGCGTGACGCCCAGCCTGTCCTGCCTGGTGCTCTTTAACCCCTTCAGCGCCGCCCTGCTGGACAGAGGGAGGAAGTGCGGTATGGAGATCCTGCAGCTCTCACAGATCATGGATCTGGGAAGAGAAAATTTAAAGCCACCTGTGCCTCCTAAACCTCAAGATCTGGCTGTTGTGTGTTTCACCAGTGGGACAACAGGAAAGCCTAAAGGAGCCATGATAACTCACGGCAACATCGCCTCCAACACCTCCTCGGTCATCAAGATCCTGGAGGGCTACTTTGTGATCCGTCAAGAGGACGTGTCCATCTCTTACCTGCCGCTCGCTCACATGTTTGAGCGCATGATCCAGGTGTCGATGTTTTGTCACGGGGCGAGGGTCGGCTTTTACCAGGGTGATATTTCTCTGCTGATGGATGACATAAAGACCCTGAAGCCCACTTTTTTCCCTGGGGTCCCTCGATTACTCAACCGCATCTACGACAAGATTCTGGGCTCGGTTACGTCTCCGCTGAAAAGAGTCCTCCTTCATTATGCCGTCAGGAGGAAACAGGCAGAACTGAGCAGTGGAGTCGTGAGGAACAACAGCCTGTGGGACAGACTCATCTTCAATAAGATACAGgCTAGTCTGGGTGGAAATCTGCGCTTCATCCTTACCGCATCTGCTCCAATCTCTCCTGCTGTGCTGTCCTTCCTCAGAGCCACCCTGGGCTGTCTGATTTTTGAGGGTTATGGGCAGACAGAGTGCACAGCCGGATGTACCTTCTCTATGCCTGGTGACTGGAGTGCAGGTCATGTTGGTGCTCCATTACCCTGCGCTATGGTGAAGCTAACTGATATTCCTGACATGAACTACTATGCCAAGAACGGAGAAGGAGAGatcTGCATCAGGGGTCCCAGTGTGTTTCGGGGTTATCTGAAGGATGAGGAGAGGACAGCAGAGGCTCTGGACACTGAAGGGTGGCTTCACACTGGAGACGTGGGACAATGGCTGCCTAATGGGACTTTGCGCATTGTGGACAGAAAGAAGCACATCTTCAAGCTGTCCCAGGGAGAGTACATCGCCCCAGAGAAGCTGGAGAACGTCTACACGCGCTGCGTTCCTGTCCTGCAGGTCTTTGTGCATGGAGACAGCCTACAGTCTTTTCTGATAGGAATTGTAGTTCCAGATCCAGAAGTGTTCGTCAACTGGGCCAAAGAACGAGGAATAGTCGGATCATATGAAGAGCTTTGTCAGAATCCTGATGTGAAGAAAGCGGTTCTGGAGGACATGACGGCGGTGGGCAAAGAAGCAGGACTCAAATCATTCGAGCAGGTACAATTCATGTCATCTCATACTATAAATGTGCCATTAATACCCCAGTAGGCACATGACGTCAGATTAACATCGTACTCAAACATCaagagacgttgcattttgtttggaaatgaaaatcggctTGACGTCAGAGCATTTTgctcactttccaacgcaacctagaAATCAAGCAAATATCCAcgtttaatgatgttacagcttgcaATGTGTGGATGTTGCCACTGATATCTATCAGATGTTTGATTTAGGTTGCCATAGctgatgaataaatataattatttgacttCAATATAATTATGGTTTGAGAAGTTGactagacgttggattttggtcacttttcaacacaacctaaaatcaacgtgaTTTCACATCATTAatagatgtcaaaataacattgtccttagatgctggtgacctgaatctaacctaatattaacgtcttatgatgttgtgtctCTGCTGAGATGATTCATAGGcctcttttttaaatgtacaggATGTATTTTTTTCCCTAAAGAAGTCTGGCAGGTCAGTGTTTGACAAATCAAGCTTGcgttttgtatttgtattaatgCTGTTGTAAATCTGTAGTGGTGGGACTGATTTTTaaagtggatgaatgaatgtgttttggATTGCCTGCAATGTAATTCCTGCAGGGGGCGCTGCTTCCTTTGCTTTAGCAGGATCTGACTGTTATTGCTGATCCTgtttgcgaaaaaaaaaaaaaaagcctagaaaacttttttttatatagcaaTTTTACACCAGCAGTTCATAAGACCTCTAAGCTGGACTCAAAAATCCTAGACAATTACAATGGCTAAAATAAATAGAtgattaaatagataaataaataaatggatagatggatggataaataggtagatagatagataaatagattaataaataaatagataaataaaaaataagtaaatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagataggtagataaaTCAGtatataaatagttaaataaagaaataaataagtaaataaataaataaatagacagatgaataaatgaataaataaataaatagatagacagataataaaaataaataaatagataagtaaataaatagaaaaacaaatatataagtaaataaataaatagataaataaataaataaataaataaataaatgagtaaatgaacaactagataaatagatatataggacggatagacggacggagggacagacagacggacggatatagatgggtggatgatggatagacagacagacagatagatgacagacagacagacagatagataattaactaaataactacataaataaataaatagataaataaataaacagattaatagataaataaataaacaaatagataaataaataagtaaatacataaataaataaagaagtaaatacataaataaataaatgagtaaataaatagataaattaataaacatattaatagaaaaacaaataaacaaatatataaataaatagataaataaataaacagattaatagataaataaataaacaaatagataaataaataagtaaata

Function

symbol description
acsl2 Is expressed in brain; gill; heart; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in acute myeloid leukemia and leukemia. Orthologous to human ACSL6 (acyl-CoA synthetase long chain family member 6).

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-130530-851 Is expressed in brain; gill; heart; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in acute myeloid leukemia and leukemia. Orthologous to human ACSL6 (acyl-CoA synthetase long chain family member 6).

Ensembl:

ensembl_id ENSDARG00000078399

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071799 True 3981 mRNA 0.41 20 50840565 50888806

Neighbor

gene id symbol gene type direction distance location
XLOC_036774 CABZ01060030.2 coding downstream 315205 50520139 ~ 50525360 (-)
XLOC_036773 CABZ01060030.1 coding downstream 322662 50517782 ~ 50517903 (-)
XLOC_036772 NA coding downstream 328678 50508761 ~ 50511887 (-)
XLOC_036771 ido1 coding downstream 357784 50463227 ~ 50482781 (-)
XLOC_036770 stc1 coding downstream 494319 50322769 ~ 50346246 (-)
XLOC_036776 FO704819.1 coding upstream 783 50889589 ~ 50898357 (-)
XLOC_036777 NA coding upstream 64852 50953658 ~ 50954244 (-)
XLOC_036778 rab7b coding upstream 80184 50968990 ~ 50981175 (-)
XLOC_036779 CR855300.2 coding upstream 139033 51027839 ~ 51027953 (-)
XLOC_036780 bmp1a coding upstream 276586 51165392 ~ 51293301 (-)
XLOC_036766 NA non-coding downstream 700582 50137475 ~ 50139983 (-)
XLOC_036762 NA non-coding downstream 968983 49864078 ~ 49871582 (-)
XLOC_036761 NA non-coding downstream 1014648 49803988 ~ 49825917 (-)
XLOC_036781 NA non-coding upstream 323607 51212413 ~ 51212668 (-)
XLOC_036793 NA non-coding upstream 1098004 51986810 ~ 51988347 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000050_04208939_04225972 ACSL2 coding CI01000050 null 4208939 ~ 4225972 (-)
bowfin (Amia calva) AMCG00020745 NA coding CM030127.1 CM030127.1 32071201 ~ 32083067 (-)