G1807226


Basic Information

Item Value
gene id G1807226
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 38110210 ~ 38111033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2067630
attcttgtggggaccaaacaattgattaaacctaacccaaactcctaaccttaaccctaacccctaaccctaaacaaccctaacccctaaccctaaacaacccaaactcctaacccctaaccttaaccctaactcctaaccctaaacaaccctatcccaaactcctaaccttaaccttaaccctaactcctaaccctaaacaaccctatcccaaactcctaaccttaaccctaactcctaaccctaaacaaccctatcccaaactcctaaccttaaccttaaccctaactcctaaccctaaacaaccctatcccaaactcctaaccttaaccccaactcctaaccctaaacaaccctatcccaaactcctaaccttatccctaactcctaaccctaaacagccctatcccaaactcctaaccttaaccccaactcctaaccctaaacaaccctatcccaaactcctaaccttaaccctaactcctaaccctaaacaaccctatcccaaactcctaaccttatccctaactcctaaccctaaacaaccctatcccaaactcctaaccttaaccctaactcctaaccctaaacaaccctatcccaaactcctaaccttatccctaactcctaaccctaaacaaccctatcccaaactcctaaccttaaccttatccctaactcctaaccctaaacaacCCTATCCCCTaagcctaattgtaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2067630 True 722 lncRNA 0.44 2 38110210 38111033

Neighbor

gene id symbol gene type direction distance location
mob3 LOC106582314 coding upstream 81175 38012004 ~ 38029035 (+)
LOC110501840 hsp10 coding upstream 94479 38011849 ~ 38015731 (+)
coq10b LOC106582315 coding upstream 105519 37996085 ~ 38004691 (+)
LOC110501832 LOC100380630 coding upstream 207342 37861492 ~ 37902868 (+)
LOC110502126 LOC106582321 coding upstream 283165 37824691 ~ 37827045 (+)
LOC110501844 tbccd1 coding downstream 339792 38450825 ~ 38456288 (+)
LOC110501847 LOC106582368 coding downstream 365211 38476244 ~ 38485443 (+)
LOC110501849 armc8 coding downstream 380532 38491565 ~ 38519507 (+)
LOC110501851 LOC106582376 coding downstream 629953 38740986 ~ 38754494 (+)
plekhm3 plekhm3 coding downstream 647821 38758854 ~ 38843342 (+)
G1807138 sf3b1 non-coding upstream 104077 37975196 ~ 38006133 (+)
G1807134 NA non-coding upstream 139036 37970362 ~ 37971174 (+)
G1807089 NA non-coding upstream 196470 37913009 ~ 37913740 (+)
G1807088 NA non-coding upstream 197760 37908830 ~ 37912450 (+)
G1806883 NA non-coding upstream 259665 37850278 ~ 37850545 (+)
G1807247 NA non-coding downstream 31718 38142751 ~ 38143249 (+)
G1807256 NA non-coding downstream 44883 38155916 ~ 38158979 (+)
G1807283 NA non-coding downstream 102361 38213394 ~ 38213785 (+)
G1807287 NA non-coding downstream 110055 38221088 ~ 38221822 (+)
G1807306 NA non-coding downstream 171091 38282124 ~ 38316253 (+)
LOC110501805 dirc2 other upstream 1667133 36435000 ~ 36520762 (+)
G1805191 NA other upstream 1746280 36363596 ~ 36363930 (+)
G1804873 NA other upstream 2234758 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 2350784 35740427 ~ 35760519 (+)
G1800754 NA other upstream 5196028 32910793 ~ 32914182 (+)
G1807376 NA other downstream 295104 38406137 ~ 38411163 (+)
G1807566 NA other downstream 751707 38862740 ~ 38863136 (+)
G1808209 NA other downstream 1038047 39149080 ~ 39151333 (+)
G1808787 NA other downstream 1582880 39693913 ~ 39694868 (+)

Expression


Co-expression Network