G1807287


Basic Information

Item Value
gene id G1807287
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 38221088 ~ 38221822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2067704
ctctctctctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctctctgtctctctgtctctctctctgtctctctctctctctgtctctctgtctctctctctgtctctctctctctgtctctctctctctctctctctctctctctctctgtctctctctctgtctctctctctctgtctctctctctgtctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2067704 True 233 lncRNA 0.50 2 38221088 38221822

Neighbor

gene id symbol gene type direction distance location
LOC110501842 LOC106586352 coding upstream 7897 38079807 ~ 38213191 (+)
mob3 LOC106582314 coding upstream 192053 38012004 ~ 38029035 (+)
LOC110501840 hsp10 coding upstream 205357 38011849 ~ 38015731 (+)
coq10b LOC106582315 coding upstream 216397 37996085 ~ 38004691 (+)
LOC110501832 LOC100380630 coding upstream 318220 37861492 ~ 37902868 (+)
LOC110501844 tbccd1 coding downstream 229003 38450825 ~ 38456288 (+)
LOC110501847 LOC106582368 coding downstream 254422 38476244 ~ 38485443 (+)
LOC110501849 armc8 coding downstream 269743 38491565 ~ 38519507 (+)
LOC110501851 LOC106582376 coding downstream 519164 38740986 ~ 38754494 (+)
plekhm3 plekhm3 coding downstream 537032 38758854 ~ 38843342 (+)
G1807283 NA non-coding upstream 7303 38213394 ~ 38213785 (+)
G1807256 NA non-coding upstream 62109 38155916 ~ 38158979 (+)
G1807247 NA non-coding upstream 77839 38142751 ~ 38143249 (+)
G1807226 NA non-coding upstream 110055 38110210 ~ 38111033 (+)
G1807138 sf3b1 non-coding upstream 214955 37975196 ~ 38006133 (+)
G1807306 NA non-coding downstream 60302 38282124 ~ 38316253 (+)
G1807316 LOC106582371 non-coding downstream 82294 38304116 ~ 38305781 (+)
G1807420 NA non-coding downstream 317563 38539385 ~ 38539655 (+)
G1807454 NA non-coding downstream 373468 38595290 ~ 38597064 (+)
G1807458 NA non-coding downstream 392720 38614542 ~ 38685713 (+)
LOC110501805 dirc2 other upstream 1778011 36435000 ~ 36520762 (+)
G1805191 NA other upstream 1857158 36363596 ~ 36363930 (+)
G1804873 NA other upstream 2345636 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 2461662 35740427 ~ 35760519 (+)
G1807376 NA other downstream 184315 38406137 ~ 38411163 (+)
G1807566 NA other downstream 640918 38862740 ~ 38863136 (+)
G1808209 NA other downstream 927258 39149080 ~ 39151333 (+)
G1808787 NA other downstream 1472091 39693913 ~ 39694868 (+)

Expression


Co-expression Network