LOC110501849 (armc8)


Basic Information

Item Value
gene id LOC110501849
gene name armc8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 38491565 ~ 38519507 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959275.1
TGGAGGGCGGGGTATTCGGAAAGTGCTGCTCCGATTGGGGCGCTCgatagggggaagagagatggcGTGCTTGTTGGAGGCCCCTCTCCGCATCAGCGTGTTATCTGAGGTCACGGCCACCAGCCGCCATTATGTTGACCGGCTGTTCCACCCCGATCCACAGAAAGTGCTGCAGGGAGTCATtgACATGAAGAATGCTGTCATCGGAAACAACAAACAGAAAGCCAACCTGATTGTCCTGGGAGCTGTGCCCAGGTTACTGTACCTGCTCCAGCAGGGCTTATCCAGCTCTGAGCTGAGGACAGAGGTGTTGGGCTCAGAACTGAGGACAGAGGGTGCGGTGGTGCTGAGGACAGAGGTGCTGGGCTCAGAACTGAGGACAGAGGGTGCAGTGGTACTGGGCTCAGAACTGAGGACAGAGGGTGTGGTGGTACTGGGCTCAGAACTGAGGACAGAGTGTGTGGTGTTGCTGGGCTCAGAACTGAGGACAGAGGGTGCAGTGGTACTGGGCTCAGAACTGAGGACAGAGGGTGCGGTGGTGCTGAGGACAGAGTGTGTGGTGGTACTGGGCAGTCTGGCCATGGGCACAGAGAACAACATCAAGTCCCTGGTGGACTGTCACATCATCCCTGCTCTGCTGCaagGTCTGGTATGTCCAGACCTGGTCTTCATCGAGGCTTGTCTTCGCTgcctcaggacagtcttcatcaGTCCAGTCACCCCAGTGCAGCTGCTCTACACTGACCCCACTGTGATTCCCCACTTGATGTCCCTGCTGAGTCGGTCTCCGCGGACGCAGGACTACATCACCCAGATCTTCTCTCACTGCTGCAAGagtCCAGAGCATCAGACGGTTCTGTTTAACCACGGGGCGATCCAGAACATTGCTCCcatgctcatctctctctcctataagGTACGAATGCAGGCATTAAAATGCTTCTCAGTCCTGGCCTATGAGAACACTCAGGTCTCCATGACATTGGTGAATGtGCTGGTTGATGGGGATCTGCTCTCTCAGGTATTTGTCAGAATGTTGCAAAGGAATCTGCCCATTGAAATGCAGCTCACAGCAGCCAAGTGTCTAACATACATGTGTCGAGCGGGAGCCATCAGAACAGATGACAGGTGCATTGttttaaagaccctgccgtGCCTGGTGAGGATGTGCAGTAAGGAGCGTCTGTTGGAGGAGCGTGTGGAGGGGGCAGAGACCCTGGCCTACCTGATGGAGCCTGATGTGGAGCTGCAGAGGATCGCCAGTGTAACCGACCACCTAGTGGCCATGCTGGCTGACTACTTCAAATACCCCAGCTCTGTCAGCGCCATCACTGACATCAAGAGGTTGGATCACGACTTGAAGCACGCACATGAGCTGAGGCAAGCTGCCTTCAAGCTGTACGCCTCACTGGGCTCCAACGATGAAGACATCCGCAAGAAGaTCACAGAGACCGAGAATATGATGGACAGGATAGTGAGCGGCCTGTCAGAATCCAGCATCAAGGTGCGGCTAGCAGCCGTCAGGTGTCTTCACAGTCTGTCCCGGTCAGTCCAGCAGTTGAGGACTAGTTTTCATGACCACGCAGTATGGAAACCCCTTATGAAGttgTTACAGAACGCTCCAGACGAAGTGCTGGTCATGGCCTCTTCTACACTATGCAATCTGCTGCTGGAGTTCTCCCCCAGCAAAGAGCCTATCCTGGAGTCAGGGGTGGTAGAGTTACTGTGCAGTCTGACCCAGAGTGACAGTCCAGCCCTGAGGGTCAACGGCATTTGGGCTCTCATGaACATGGCGTTCCAGGCAGACCAGAAGGTGAAAGGGGAGATTGTGAGAGCTTTGGGGACGGAGCAGCTTTTCCGTCTGCTCTCTGACCCGGACACTAACGTCCTGATGAAGACCTTGGGCCTGTTACGGAACCTGCTCTCCACACGACctcacataGACCAGATCATGAGTTCCCATGGGAAGCAGATCATGCAGGCGGTCACTCTGATCCTGGAGGGGGAACACAGCATTGAGGTCAAGGAGCAGACACTCTGCATCCTAGCCAATATTGCCGATGGCAACACAGCCAAGGAACTCATCATGACCAATGACGACATCCTCCAGAAAATCAAATATTACATGGGTCACTCTAATGCGAAGCTCCAGCTGGCAGCAACATTCTGTATCTCCAACCTGATCTGGAATGAGGAGGGCAGTGAGGCCGATGCCATGCCAGGCTGCCAGGAGCGTCAGGACAAGCTGAGGGAGTTGGGCTTTGTAGACATTCTGCACAAACTCACCCAGGCCTTAGACCCCAACCTCTGTGAaaggGCGAAAACAGCGATGCAGCATTATCTGGCGTGACCCCACGGGGGCAGTCTCAGATGTTGTTTCCCCTAACAACACAACTAACAAACCAACCGCCTGCCAGGAGGAGACCTGCCAGGAGGAGACCTGCCTCCTTGCTGCCATTGTTTTGTTCTGATCTCCTTCACTTTAATCTTCCGTTTTTGTTTGGTTGCACAAAGACACCTTTTGAGCTGCAGAGGCAGAGTCCCCTTCCACCTCATCACCCCAATACTGACCTCCATCCCAGCCGGAGACTTTAAGACTCGGTTGGATGGGGAAACGAGTGTTCGCTGCTCACCAACTGGGGGTAggtttcattattattattatttttttatgcaAAGAGGTGaagattttgtttttgtttcttgGACTTGATGTGAAGGAAGAAAGGATTAGTAATGTGCAGCACAGCAGCCAGCCATCGCAGCACATCGCCACCTTGTGGCCAGGAGGCCTAGGTGCTTTTGGACTCGTTATGgaggagatggacagaaagacGTCACAGAGCCGGACTGAAGGTTCTGACGGACTGAAGGTTCTGACGGACTGAAGGTTCTGAAGGACTAAAGGTTCTGAAGGACTAAAGGTTCTGACGGACTAAAGGTTCTGACGGACTAAAGGTTCTGAAGGACTAAAGGTTCTGATGGACTAAAGGTGCTGACGGACTGAAGGTTCTGATGGACTAAAGGTTCTGACGGAGAGGGCAGGGTTGTGGGAGCATCACTTCCTCTTGCTTTAATTTAGCTAATTATTGATTATtgatattactattattattatttgaatggCTTTATGTCACGAGAGGACACGTTTGGGTAAAAAAGACTGTTAATTTTGAAATGTGTGGTGATTTCTTTTTTTGTGTGCATACATACCTCgtaaatatatataaacatataaatatattttggggATTTTTCATctctttgttttcttcctgtttcTGATCCTGGTTCCAACAGGAagtagggtgtgtgtttctatggTGTGAACAGAGCAACAATGGGAGGATCCTGTGGTCaataaaatatttacaaatgt
>XR_005038833.1
TGGAGGGCGGGGTATTCGGAAAGTGCTGCTCCGATTGGGGCGCTCgatagggggaagagagatggcGTGCTTGTTGGAGGCCCCTCTCCGCATCAGCGTGTTATCTGAGGTCACGGCCACCAGCCGCCATTATGTTGACCGGCTGTTCCACCCCGATCCACAGAAAGTGCTGCAGGGAGTCATtgACATGAAGAATGCTGTCATCGGAAACAACAAACAGAAAGCCAACCTGATTGTCCTGGGAGCTGTGCCCAGGTTACTGTACCTGCTCCAGCAGGGCTTATCCAGCTCTGAGCTGAGGACAGAGGTGTTGGGCTCAGAACTGAGGACAGAGGGTGCGGTGGTGCTGAGGACAGAGGTGCTGGGCTCAGAACTGAGGACAGAGGGTGCAGTGGTACTGGGCTCAGAACTGAGGACAGAGGGTGTGGTGGTACTGGGCTCAGAACTGAGGACAGAGTGTGTGGTGTTGCTGGGCTCAGAACTGAGGACAGAGGGTGCAGTGGTACTGGGCTCAGAACTGAGGACAGAGGGTGCGGTGGTGCTGAGGACAGAGTGTGTGGTGGTACTGGGCAGTCTGGCCATGGGCACAGAGAACAACATCAAGTCCCTGGTGGACTGTCACATCATCCCTGCTCTGCTGCaagGTCTGGTATGTCCAGACCTGGTCTTCATCGAGGCTTGTCTTCGCTgcctcaggacagtcttcatcaGTCCAGTCACCCCAGTGCAGCTGCTCTACACTGACCCCACTGTGATTCCCCACTTGATGTCCCTGCTGAGTCGGTCTCCGCGGACGCAGGACTACATCACCCAGATCTTCTCTCACTGCTGCAAGagtCCAGAGCATCAGACGGTTCTGTTTAACCACGGGGCGATCCAGAACATTGCTCCcatgctcatctctctctcctataagGTACGAATGCAGGCATTAAAATGCTTCTCAGTCCTGGCCTATGAGAACACTCAGGTCTCCATGACATTGGTGAATGtGCTGGTTGATGGGGATCTGCTCTCTCAGGTATTTGTCAGAATGTTGCAAAGGAATCTGCCCATTGAAATGCAGCTCACAGCAGCCAAGTGTCTAACATACATGTGTCGAGCGGGAGCCATCAGAACAGATGACAGGTGCATTGttttaaagaccctgccgtGCCTGGTGAGGATGTGCAGTAAGGAGCGTCTGTTGGAGGAGCGTGTGGAGGGGGCAGAGACCCTGGCCTACCTGATGGAGCCTGATGTGGAGCTGCAGAGGATCGCCAGTGTAACCGACCACCTAGTGGCCATGCTGGCTGACTACTTCAAATACCCCAGCTCTGTCAGCGCCATCACTGACATCAAGAGGTTGGATCACGACTTGAAGCACGCACATGAGCTGAGGCAAGCTGCCTTCAAGCTGTACGCCTCACTGGGCTCCAACGATGAAGACATCCGCAAGAAGaTCACAGAGACCGAGAATATGATGGACAGGATAGTGAGCGGCCTGTCAGAATCCAGCATCAAGGTGCGGCTAGCAGCCGTCAGGTGTCTTCACAGTCTGTCCCGGTCAGTCCAGCAGTTGAGGACTAGTTTTCATGACCACGCAGTATGGAAACCCCTTATGAAGttgTTACAGAACGCTCCAGACGAAGTGCTGGTCATGGCCTCTTCTACACTATGCAATCTGCTGCTGGAGTTCTCCCCCAGCAAAGAGCCTATCCTGGAGTCAGGGGTGGTAGAGTTACTGTGCAGTCTGACCCAGAGTGACAGTCCAGCCCTGAGGGTCAACGGCATTTGGGCTCTCATGaACATGGCGTTCCAGGCAGACCAGAAGGTGAAAGGGGAGATTGTGAGAGCTTTGGGGACGGAGCAGCTTTTCCGTCTGCTCTCTGACCCGGACACTAACGTCCTGATGAAGACCTTGGGCCTGTTACGGAACCTGCTCTCCACACGACctcacataGACCAGATCATGAGTTCCCATGGGAAGCAGATCATGCAGGCGGTCACTCTGATCCTGGAGGGGGAACACAGCATTGAGGTCAAGGAGCAGACACTCTGCATCCTAGCCAATATTGCCGATGGCAACACAGCCAAGGAACTCATCATGACCAATGACGACATCCTCCAGAAAATCAAATATTACATGGCTGCCAGGAGCGTCAGGACAAGCTGAGGGAGTTGGGCTTTGTAGACATTCTGCACAAACTCACCCAGGCCTTAGACCCCAACCTCTGTGAaaggGCGAAAACAGCGATGCAGCATTATCTGGCGTGACCCCACGGGGGCAGTCTCAGATGTTGTTTCCCCTAACAACACAACTAACAAACCAACCGCCTGCCAGGAGGAGACCTGCCAGGAGGAGACCTGCCTCCTTGCTGCCATTGTTTTGTTCTGATCTCCTTCACTTTAATCTTCCGTTTTTGTTTGGTTGCACAAAGACACCTTTTGAGCTGCAGAGGCAGAGTCCCCTTCCACCTCATCACCCCAATACTGACCTCCATCCCAGCCGGAGACTTTAAGACTCGGTTGGATGGGGAAACGAGTGTTCGCTGCTCACCAACTGGGGGTAggtttcattattattattatttttttatgcaAAGAGGTGaagattttgtttttgtttcttgGACTTGATGTGAAGGAAGAAAGGATTAGTAATGTGCAGCACAGCAGCCAGCCATCGCAGCACATCGCCACCTTGTGGCCAGGAGGCCTAGGTGCTTTTGGACTCGTTATGgaggagatggacagaaagacGTCACAGAGCCGGACTGAAGGTTCTGACGGACTGAAGGTTCTGACGGACTGAAGGTTCTGAAGGACTAAAGGTTCTGAAGGACTAAAGGTTCTGACGGACTAAAGGTTCTGACGGACTAAAGGTTCTGAAGGACTAAAGGTTCTGATGGACTAAAGGTGCTGACGGACTGAAGGTTCTGATGGACTAAAGGTTCTGACGGAGAGGGCAGGGTTGTGGGAGCATCACTTCCTCTTGCTTTAATTTAGCTAATTATTGATTATtgatattactattattattatttgaatggCTTTATGTCACGAGAGGACACGTTTGGGTAAAAAAGACTGTTAATTTTGAAATGTGTGGTGATTTCTTTTTTTGTGTGCATACATACCTCgtaaatatatataaacatataaatatattttggggATTTTTCATctctttgttttcttcctgtttcTGATCCTGGTTCCAACAGGAagtagggtgtgtgtttctatggTGTGAACAGAGCAACAATGGGAGGATCCTGTGGTCaataaaatatttacaaatgt

Function

symbol description
armc8 Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of GID complex and ubiquitin ligase complex. Orthologous to human ARMC8 (armadillo repeat containing 8).

NR:

description
armadillo repeat-containing protein 8

GO: NA

KEGG:

id description
K23336 ARMC8; armadillo repeat-containing protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959275.1 False 3379 mRNA 0.51 22 38491565 38519507
XR_005038833.1 True 3285 mRNA 0.51 21 38491565 38519507

Neighbor

gene id symbol gene type direction distance location
LOC110501847 LOC106582368 coding upstream 6122 38476244 ~ 38485443 (+)
LOC110501844 tbccd1 coding upstream 35277 38450825 ~ 38456288 (+)
LOC110501842 LOC106586352 coding upstream 278374 38079807 ~ 38213191 (+)
mob3 LOC106582314 coding upstream 462530 38012004 ~ 38029035 (+)
LOC110501840 hsp10 coding upstream 475834 38011849 ~ 38015731 (+)
LOC110501851 LOC106582376 coding downstream 221479 38740986 ~ 38754494 (+)
plekhm3 plekhm3 coding downstream 239347 38758854 ~ 38843342 (+)
LOC110501853 LOC106582378 coding downstream 349234 38868673 ~ 38875945 (+)
zgc:162780 yh09 coding downstream 932085 39451592 ~ 39455125 (+)
LOC110501860 LOC106582389 coding downstream 958747 39478254 ~ 39566624 (+)
G1807316 LOC106582371 non-coding upstream 185784 38304116 ~ 38305781 (+)
G1807306 NA non-coding upstream 188990 38282124 ~ 38316253 (+)
G1807287 NA non-coding upstream 269743 38221088 ~ 38221822 (+)
G1807283 NA non-coding upstream 277780 38213394 ~ 38213785 (+)
G1807256 NA non-coding upstream 332586 38155916 ~ 38158979 (+)
G1807420 NA non-coding downstream 19878 38539385 ~ 38539655 (+)
G1807454 NA non-coding downstream 75783 38595290 ~ 38597064 (+)
G1807458 NA non-coding downstream 95035 38614542 ~ 38685713 (+)
G1807481 NA non-coding downstream 166829 38686336 ~ 38686626 (+)
G1807483 NA non-coding downstream 167964 38687471 ~ 38687677 (+)
G1807376 NA other upstream 80402 38406137 ~ 38411163 (+)
LOC110501805 dirc2 other upstream 2048488 36435000 ~ 36520762 (+)
G1805191 NA other upstream 2127635 36363596 ~ 36363930 (+)
G1807566 NA other downstream 343233 38862740 ~ 38863136 (+)
G1808209 NA other downstream 629573 39149080 ~ 39151333 (+)
G1808787 NA other downstream 1174406 39693913 ~ 39694868 (+)
G1809107 NA other downstream 1404907 39924414 ~ 39925395 (+)
G1810553 NA other downstream 2670182 41189689 ~ 41192492 (+)

Expression


Co-expression Network