XLOC_037676 (znf804a)


Basic Information

Item Value
gene id XLOC_037676
gene name znf804a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 11906770 ~ 12034444 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073980
CTGCTCCGCACGGAAGGTGAGAGAACGGGAAAAACACACTGCTGGGGGATACCAGAACACGTCAGAGAGAGCTGCAAAAAGTGACAACAGCAGAGCCAGCTACAAGGTTTGAGGATTCGAGAGGATGAGGGAACACGCTTGCTCTGTTCCTGACTGAAAGGAAGTGAGCTTGTGTCTGAAAGCGAGAAACAAAAGGTTTGTTGGGTGGACTTGTTTCCTTCTCTCTCTCGGCTAGTGCATGGAAGCTTCGGGTCCCCCATGGCGTGTTATTATATTGTCATCAGCTCCACGCATCTCAGCAATGGACACTTTCGAAACATCAAGGGAGTTTTCCGAGGTCCCCTCTGCAAGAATGGCAGCAAAAACTTGGATTATGCTGAGAAGGAAAAAACCTTGGCCAAAGCCCTGGAGGACCTCAAGGCCAACTTCTACTGTGAGCTGTGTGACAAACAGTATTACAAGCATCAAGAGTTTGACAACCACATCAACTCGTATGACCACGCTCACAAGCAGAGACTGAAGGAACTGAAGCAGAGAGAGTTTGCCCGCAATGTGGCCTCCAAATCCAGGAAGAACGAGAGGAAACAGGAGAGAGCTCTCAGACGCCTACATGAGCTTGCTGAACAACGCAGAGAAGTGCAATGTGCCCCAGGAAGTGGTCCTATGTTTAAGTCTACCACAGTGGCAGTGGAAGGTTCTTTCAGGGAGTCCTACTGTGATGATGATGCCCAAGAAGAGAACCAAAACTGCATGGCTCAAGATTCGGGGGGTCAGATCCATTCCAGCAGTTGTGGCATAGCTAGTAAACAGTCACCCTGGTCATACAATGGGAGGGCCAAAAAGCAAACTTTTAGACGCAAAATTGCATTCTCTTTTTCCTTTCCAAAGAAAGCAACTGTTAAGCTTGAGTCATCAGCAGCGGTTTTCTGTGAGAGCACGGAGGAGGGGTCGATGGAGCGAAGCCGCAGACAAAGACTCAGAACACCCCCTGTTGAGCTTGACCTCCCTGGGTCCCCCATGGAGGAAAAAGTACTAAAATGCGAGGAGGCAATTTACAGCACTGGCACACAGCAGAGCGAGCATTTCCAAAAAAGTGACAGCACCGAAATTCAGGGGTCATCAGATATCCCTGTGGCAGGGGAAAGCCCTTCGTCAACGGCAACAGATTTGTGTGCTTTGCTTGTTTACTCAGAGAATGTTCCTAGTCCTGCCATGTCCCCGTTAAACACTTCCCCTTTTTGTTTGAACAGAGCTGATATTGTTCTTGAATCTGAAGACTCTGTTGAGAGCTTAAAAAGCAGCAGTGCTGAAAGTAAATCTGAGACCTCTGAGGATGTGACAGAAGAGGGTAGTGGTGTTACAGAGGAGGGGTGCTTGGCCATCAGTGAGCCTCCCGAAAAGATTTTCTCAGATGAGCCACCTAAGAATGATTCTTCTCAAAGAGAAGAGAAAGTTGAGGAAGCACCTGCAAAGTCACCTTATGCTTTCACAAAACCCAGCCAGCCTTTTTTCTCTGTTTTAAGCAGAGACGGAAACACCATCTTCCAGTGGCCCTCTGAGATGGTGTCCTTCACAAGGACAGAGCCATCCCTGTCTTTTAGTTGCAACCCCCTCCATTTTGACTTCAAGAGGACACGGATTAGAAGGTCTGCCGACACCCAGGAGATGACTGAGCCCAAAACTGATGAGGAATTATCTGTCTGCTCAGGTTTCAAATCCTGCCACTCTGACAAGCACATCGAGGAATCTACAGCCACCCCCAGAAACAGTCCCAGCCAAGGAGCAGAAGGCAAGGTCAGAAAGTGTTATCAGTATTCAAGTGACACAGAGAGTTGTGTCAGGTTGAAAACACATGACAAGTGTAGACATTCCAAAGATTGGATTCATGCAAGCAAGAGAGTGGAAGAGAAATTGCGGAAAAGGGATCAACGTCATTACAGGAGCCATGCTAAAAGAAAACGCAGAAGGCGGAAAAGGAGGAGAGACAGACACTGGGAGACAGAGAGCAGTATGGTGAAATCTAAGAAATTCCTCAGACGACCTGAGTGTGTGAAAGGACTTGATAGCCAATTTAGAGGCACCACTTCACAGCAAGTGCATCCATTAGAGAAGTCAAAGCAATCAGCTCAAAATCAGGCTGAGGATAGCAGCACAGCTACCGTAGTTGAGGAAGGGGTGGGAAGCAGAAGGCAGGAGGCAGCAGCCAACGTAAACTGCTCAGCGGGCTGCATCATTCTCTCTGATGAGTTCTGTGCCGATGGTGAAAAGGTGCTTGGGAACAGCAGGGAAAAGCCTGACAATCCAACTGCAGGGGAGCTTACGTCTATAGAACAGTATCCCCGTAACCGAGACACATCTCACTTTCATGAATCCGGTTCAGCCGAAGGGGGGCAAGAGGAGAATCCTAACCCACTAGTGACTAACAGAGATGGGGCATGTGAAGGGCAGAGTTTGAAAAGACCGTGTTCAGAATCTCTAAGAGACAGACATGAGTTTTGTGACTCCTGTCAGTCACTGACAGATTTTTCTGATAAATGCACAGAACCTACCTGTTGTGAGCATGGGACAAGCAGGAAAAGACAAAGGCGGACACAGGATCAAGACCAAACCCCATGCCTTGCAATTGAATGTCCCGTTGTTCACAACTCTGTTTTGGAAGAACAGGACAAGGCCACAGTTGAGTCGAGCATGAAATGCCTTGTTTTAAAAGGCACGTGTGACAGCTCAAACAGGTCAGACCTAAACTCATGCAGTATTGATGATGGAGAGAGCTGCACGGCTGATCCTCAGACATTTAGTTCCATTAGCAGTGCCCTGGGTCACACTGTGGTGGAGAGCAGCGACGGGCAGCAGAGCTCCTCCTCTCAGATCAATGCTTCATGCACCAAGGGCAGTTCAAATCTCCTAGAGACAGATTCAAAGCTCTTGGCGGAGCCAACAAAAGAGAATAGTGAGTCAAAAGCAGCACAAGCCCCCTTAAAGAACTGTAACAAGTATTCAGCGGCTGCTCAGGCCTGCCTGCTGGATGTGAGAGAGTTAGCCCTGCAGAGGACTGAAAAAGCCACCCAAGACAAATCATGTCAGCATAGCCTTCAACCCCCACCGCAGAGATTTCACCTAGGCATTCAGGCTGAGGAGAAGTTGAGCAGAGAGTGCTTCCACACCACCGGCAGCCTGTTCCAACACTCTCCATCATTCACAGCCCCCTCAGACAGCATGGAGAGACACTGTCTCCTGCAGATACAGAGCCACGGACAGGTGCTACACCAGCAGGTTTTCCCCACCAAGCTCAAATCTGTCCTTCACAGGCCACATCTGCCCATGTCATCTGCTGTCCTCCATCCAGTTCACCTGTCACCCTCTGTGCCTTCCGGCTCTATAACAATACGTCACACCATACTACAGCACCATGCTGCTTTCCTGCCCCCACAGCCACCCATTTACCCCCAGGTAGTGCCTGTTTCTCGACTTTCACTAGGAGCTGAGATCTGTCCACCCACCGCTTCTCCTTTTGTGGCCTCTCCACAGGTACCCGTGGTGGCGCCCCCTAATATTCATCCAATGACTGTAACCTTTCATGCCCTGCCACGACCTGCCATGTTTTCGCCTATGTTGACCCCTCATCCTGCTGTCATCCCCCTGCAGTCTCTGTTCTAG

Function

symbol description
znf804a Predicted to enable metal ion binding activity. Predicted to be active in nucleus. Orthologous to human ZNF804A (zinc finger protein 804A).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-632 Predicted to enable metal ion binding activity. Predicted to be active in nucleus. Orthologous to human ZNF804A (zinc finger protein 804A).

Ensembl:

ensembl_id ENSDARG00000027079

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073980 True 3657 mRNA 0.49 4 11906770 12034444

Neighbor

gene id symbol gene type direction distance location
XLOC_037675 NA coding downstream 51465 11822379 ~ 11855305 (-)
XLOC_037674 zc3h15 coding downstream 230279 11664797 ~ 11676491 (-)
XLOC_037673 NA coding downstream 251739 11595987 ~ 11655031 (-)
XLOC_037672 umps coding downstream 319700 11576502 ~ 11587070 (-)
XLOC_037671 NA coding downstream 334416 11571312 ~ 11572354 (-)
XLOC_037677 NA coding upstream 42399 12076843 ~ 12171785 (-)
XLOC_037678 nup35 coding upstream 225025 12259469 ~ 12401871 (-)
XLOC_037679 C1H3orf70 coding upstream 368845 12403289 ~ 12424794 (-)
XLOC_037680 ehhadh coding upstream 393782 12428226 ~ 12443726 (-)
XLOC_037681 igf2bp2a coding upstream 434056 12468500 ~ 12575776 (-)
XLOC_037667 BX000444.1 non-coding downstream 1060221 10845918 ~ 10846549 (-)
XLOC_037663 NA non-coding downstream 1536145 10368380 ~ 10370625 (-)
XLOC_037688 NA non-coding upstream 855454 12889898 ~ 12903013 (-)
XLOC_037689 NA non-coding upstream 911113 12945557 ~ 12948957 (-)
XLOC_037690 NA non-coding upstream 920123 12954567 ~ 12956248 (-)
XLOC_037691 NA non-coding upstream 1062777 13097221 ~ 13120257 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000036_01611248_01620780 ZNF804A coding CI01000036 null 1611119 ~ 1621389 (-)