XLOC_003770 (prr13)


Basic Information

Item Value
gene id XLOC_003770
gene name prr13
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 13179 ~ 18449 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007266
ATATATCCTCAGTTAGCCTACAGAAAGCTGCTTCAGTTCCCCAGCTCCTCCACCGTCCCTCTGCAGATCTGCAGTCAATAATCAATAATCGCTGATTGACTCGATCAATAGCACAGGTAAGGCGGTCGCACTGCGTGCGCAGCCCTGACGTCACGCCGGTGCTCGTGCTCTGGCTCGCGGAAGCGGAAGTCTTTCAGTGTGTTCGGGATTGTCGGGGAAAGGTGTGTGACCGAGACATTCATCATCATCAGATCAGCTGGACGAGGGGACCATGTGGCCGAATCAAGGACCGCCCAATCCTGCCTATCCCTGCCCTCCAAACCCATCCTACCCAGCCATGCCCATCCCATCAGGCCCTGGGCACAACCCGTCCTATCCGGCCATGCCTATCCCATCAGGACCCGGGGTTAACCCAATGTACCCGCCGGGCATGAACCAGCCCATGCCGCTCCCACACATGGGTCCCCATCATCAGCCTGCGGTGCCTGGTCCATATGGGCCGTACCCGGGTGCAGGAGTGCCGTGCACCGTCCCCCAGTATGGAGGACATCCGGCGGGACACAAGAAACACaagaagatgaagaagatgaagaaaGCGCACAAGGAGCACAAGCACATGAAGCATGGCAAGAGCAAGtcgtCCTCCTCCTCGTCCTCCTCCAGCAGTGACTCTGACTGATGTTCTGCTCCTGCAGTGGTTCTGGCTCGCCGCTGACGCCTGCGCTGTCAACATGTTCATCTGCTGATAATCGATGATGAATATCTGTGCCTTACACTACACACTGATCAAACCAGACACAATATTCATATATAGAGAATCCTGCAATAATGTAATGTCAATATAATATCAGTCCTGCAGTCATGTTCATATAGTCGTCTTTATTCCCGAGTGAACGCTGTGAGCTGCTCAAATCAACATGTGAGAGTCTGATAATCAAGGAGATCTGCagtaaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgcgtgtgtgtgtgattaattaATGTGTGTGAAATCAATAAAGTCAACAAATGCTCTCGCTGGAGTGTGTATTCCTG
>TCONS_00007267
AGTGTGTTCGGGATTGTCGGGGAAAGGTGTGTGACCGAGACATTCATCATCATCAGATCAGCTGGACGAGGGGACCATGTGGCCGAATCAAGGACCGCCCAATCCTGCCTATCCCTGCCCTCCAAACCCATCCTACCCAGCCATGCCCATCCCATCAGGCCCTGGGCACAACCCGTCCTATCCGGCCATGCCTATCCCATCAGGACCCGGGGTTAACCCAATGTACCCGCCGGGCATGAACCAGCCCATGCCGCTCCCACACATGGGTCCCCATCATCAGCCTGCGGTGCCTGGTCCATATGGGCCGTACCCGGGTGCAGGAGTGCCGTGCACCGTCCCCCAGTATGGAGGACATCCGGCGGGACACAAGAAACACaagaagatgaagaagatgaagaaaGCGCACAAGGAGCACAAGCACATGAAGCATGGCAAGAGCAAGTGGTTCTGGCTCGCCGCTGACGCCTGCGCTGTCAACATGTTCATCTGCTGATAATCGATGATGAATATCTGTGCCTTACACTACACACTGATCAAACCAGACACAATATTCATATATAGAGAATCCTGCAATAATGTAATGTCAATATAATATCAGTCCTGCAGTCATGTTCATATAGTCGTCTTTATTCCCGAGTGAACGCTGTGAGCTGCTCAAATCAACATGTGAGAGTCTGATAATCAAGGAGATCTGCagtaaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgcgtgtgtgtgtgattaattaATGTGTGTGAAATCAATAAAGTCAACAAA

Function

symbol description
prr13 Orthologous to human PRR13 (proline rich 13).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-080709-1 Orthologous to human PRR13 (proline rich 13).

Ensembl:

ensembl_id ENSDARG00000086216

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007266 False 1085 mRNA 0.52 4 13179 18449
TCONS_00007267 True 806 mRNA 0.51 4 13205 18254

Neighbor

gene id symbol gene type direction distance location
XLOC_003769 MYG1 coding downstream 832 6899 ~ 12347 (-)
XLOC_003771 sp1 coding upstream 1219 19668 ~ 28747 (-)
XLOC_003772 col2a1b coding upstream 13558 32007 ~ 56763 (-)
XLOC_003773 CABZ01072245.1 coding upstream 42741 61190 ~ 71540 (-)
XLOC_003774 elmo2 coding upstream 69798 88247 ~ 103157 (-)
XLOC_003775 arfgap1 coding upstream 104185 122634 ~ 127785 (-)
XLOC_003938 BX324177.10 misc upstream 11320355 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 11349145 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 11352006 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 11362455 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 11365384 11383833 ~ 11384130 (-)
XLOC_003776 NA non-coding upstream 109709 128158 ~ 129166 (-)
XLOC_003780 CU633745.1 non-coding upstream 165121 183570 ~ 190461 (-)
XLOC_003781 NA non-coding upstream 175011 193460 ~ 194715 (-)
XLOC_003787 CR855375.2 non-coding upstream 330664 349113 ~ 351701 (-)

Expression


Co-expression Network