RNA id: TCONS_00007266


Basic Information

Item Value
RNA id TCONS_00007266
length 1085
RNA type mRNA
GC content 0.52
exon number 4
gene id XLOC_003770
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 13179 ~ 18449 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATATATCCTCAGTTAGCCTACAGAAAGCTGCTTCAGTTCCCCAGCTCCTCCACCGTCCCTCTGCAGATCTGCAGTCAATAATCAATAATCGCTGATTGACTCGATCAATAGCACAGGTAAGGCGGTCGCACTGCGTGCGCAGCCCTGACGTCACGCCGGTGCTCGTGCTCTGGCTCGCGGAAGCGGAAGTCTTTCAGTGTGTTCGGGATTGTCGGGGAAAGGTGTGTGACCGAGACATTCATCATCATCAGATCAGCTGGACGAGGGGACCATGTGGCCGAATCAAGGACCGCCCAATCCTGCCTATCCCTGCCCTCCAAACCCATCCTACCCAGCCATGCCCATCCCATCAGGCCCTGGGCACAACCCGTCCTATCCGGCCATGCCTATCCCATCAGGACCCGGGGTTAACCCAATGTACCCGCCGGGCATGAACCAGCCCATGCCGCTCCCACACATGGGTCCCCATCATCAGCCTGCGGTGCCTGGTCCATATGGGCCGTACCCGGGTGCAGGAGTGCCGTGCACCGTCCCCCAGTATGGAGGACATCCGGCGGGACACAAGAAACACaagaagatgaagaagatgaagaaaGCGCACAAGGAGCACAAGCACATGAAGCATGGCAAGAGCAAGtcgtCCTCCTCCTCGTCCTCCTCCAGCAGTGACTCTGACTGATGTTCTGCTCCTGCAGTGGTTCTGGCTCGCCGCTGACGCCTGCGCTGTCAACATGTTCATCTGCTGATAATCGATGATGAATATCTGTGCCTTACACTACACACTGATCAAACCAGACACAATATTCATATATAGAGAATCCTGCAATAATGTAATGTCAATATAATATCAGTCCTGCAGTCATGTTCATATAGTCGTCTTTATTCCCGAGTGAACGCTGTGAGCTGCTCAAATCAACATGTGAGAGTCTGATAATCAAGGAGATCTGCagtaaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgcgtgtgtgtgtgattaattaATGTGTGTGAAATCAATAAAGTCAACAAATGCTCTCGCTGGAGTGTGTATTCCTG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-080709-1 Orthologous to human PRR13 (proline rich 13).

Ensembl:

ensembl_id ENSDART00000172050

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008720 lncRNA upstream 34423 52872 ~ 53556 (-) False XLOC_003772
TCONS_00008721 lncRNA upstream 34423 52872 ~ 56763 (-) True XLOC_003772
TCONS_00007276 lncRNA upstream 42741 61190 ~ 71540 (-) False XLOC_003773
TCONS_00007275 lncRNA upstream 42741 61190 ~ 71540 (-) True XLOC_003773
TCONS_00008722 lncRNA upstream 109709 128158 ~ 129155 (-) False XLOC_003776
TCONS_00007264 mRNA downstream 832 6902 ~ 12347 (-) False XLOC_003769
TCONS_00007263 mRNA downstream 860 6899 ~ 12319 (-) False XLOC_003769
TCONS_00007265 mRNA downstream 946 7393 ~ 12233 (-) True XLOC_003769
TCONS_00007262 mRNA downstream 3121 6899 ~ 10058 (-) False XLOC_003769
TCONS_00007268 mRNA upstream 1219 19668 ~ 28224 (-) False XLOC_003771
TCONS_00007269 mRNA upstream 5378 23827 ~ 27872 (-) False XLOC_003771
TCONS_00007270 mRNA upstream 5521 23970 ~ 28747 (-) False XLOC_003771
TCONS_00007271 mRNA upstream 5536 23985 ~ 27884 (-) False XLOC_003771
TCONS_00007272 mRNA upstream 5665 24114 ~ 27822 (-) False XLOC_003771
TCONS_00007296 other upstream 330664 349113 ~ 351701 (-) True XLOC_003787
TCONS_00007304 other upstream 441366 459815 ~ 459930 (-) True XLOC_003793
TCONS_00007326 other upstream 905346 923795 ~ 979748 (-) True XLOC_003803
TCONS_00007330 other upstream 1050957 1069406 ~ 1088515 (-) False XLOC_003806
TCONS_00007400 other upstream 3935274 3953723 ~ 3953837 (-) True XLOC_003853

Expression Profile

//