RNA id: TCONS_00007264


Basic Information

Item Value
RNA id TCONS_00007264
length 1465
RNA type mRNA
GC content 0.56
exon number 6
gene id XLOC_003769
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 6899 ~ 12347 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ttattaaataaaaaaaagatcctTAAATATGACGCATGCGCACACTGCATCTCCCGTCCGGCTGGCGGCGCTGCAGaggagacagagcagcagcagaGGAAGCAGCAGCAGCCGGAATCATCAGATGAGAGTGTGCTCTCGGCTCCTCAGCTCAGTGTTGATCAATAAACATCatctgatgaagatgaagatgaagatcgGCACTCACAACGGAACTTTCCACTGTGATGAAGTCCTGGCGTGTTTCCTGCTGCGGCAGCTCCCGGAATACAAGGATGCAGAGATCGTGCGCAGCAGAGATGCTTCAGTTCTGGCTGAGTGTGATGTTGTGGTGGATGTAGGAGGAGAATATGACCACAGCCGGCAGCGCTACGACCATCAccagagGGCGTTCGCGGAGAGTTTCCACAGTGTGTGTGCGCAGAAGCCGTGGGTCACCAAGCTGAGCTCCGCCGGTCTGGTGTACGTTCATTACGGGAGACGCGTCCTGCAGCAGCTCACACACCTGCAGGAGGACGAGCCACAGCTGGAGGTGCTGTACGACAAgATGTACGAGGGGTTCGTGGAGGAGGTGGATGCGGTGGATAATGGCATCAGTCAGAGTGACGGAGAGCAGCGCTACACCATCAGCTCCACCATCAGCAGCAGAGTCAGTTACCTGAACCCTCAGTGGAACAGCAAAGAGCAGGACacagagGAGGGTTTCCGGAAAGCTCTGGCGCTCGTGGGCTCTGAGTTCCAGGACCGGCTGCTGTACTTCACCAATGCCTGGCTGCCGGCACGGGACGTGGTGCTGCAGGCGATCAAGAGCCGACACCAgGTGGATGTGAGCGGGCAGGTGCTGCTGCTGCAGCAGGGCGGGTGTCCGTGGAAGGAGCACCTGTTTGCTCTGGAGAAGGAGCTGCAGCTGCAGGAGCTCATCAAGTTTGTGCTGTACTGCGATCAGAACGGCCACTGGAGGGTGCAGTGTGTGCCGGCCGGACCCAACACCTTCCAGAACCGGtaagacacacacatatatacacaccctcacacacacacacacacacacacacgcagctgAGAGTGTGTTCTGTGCTGTGCTGTGCAGGTTGAGTCTGCTGGAGGAGTGGCGAGGGCTGCGTGACGATGCGCTGTCAGAGCTCAGTGGAATCCCAGAATGCATCTTTGTGCACGCCGGCGGCTTCATCGGCGGAAACAAGACGCAGAGCGGCGCTCTGGAGATGGCCAGGAGAACACTGCAGACGGCCCCtactcactgacacacacacacacacacacacacacacacacacacacaggtgatcAGCACACCCCTGCTCAGGCTCTACTGTTTGTTTTGATGTGATATTTGTGTGTTCTGTGGAGGAAGTGGAGCAGCAGACACAGGAAGTGGACGACAGCAGATCTGCCGAACTGACTCTTGCATACAGATgagaaaactgaataaacaaatacaaaacca

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060312-32 Predicted to be active in cytoplasm and nucleus. Orthologous to human MYG1 (MYG1 exonuclease).

Ensembl:

ensembl_id ENSDART00000102293

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008720 lncRNA upstream 40525 52872 ~ 53556 (-) False XLOC_003772
TCONS_00008721 lncRNA upstream 40525 52872 ~ 56763 (-) True XLOC_003772
TCONS_00007276 lncRNA upstream 48843 61190 ~ 71540 (-) False XLOC_003773
TCONS_00007275 lncRNA upstream 48843 61190 ~ 71540 (-) True XLOC_003773
TCONS_00008722 lncRNA upstream 115811 128158 ~ 129155 (-) False XLOC_003776
TCONS_00007266 mRNA upstream 832 13179 ~ 18449 (-) False XLOC_003770
TCONS_00007267 mRNA upstream 858 13205 ~ 18254 (-) True XLOC_003770
TCONS_00007268 mRNA upstream 7321 19668 ~ 28224 (-) False XLOC_003771
TCONS_00007269 mRNA upstream 11480 23827 ~ 27872 (-) False XLOC_003771
TCONS_00007270 mRNA upstream 11623 23970 ~ 28747 (-) False XLOC_003771
TCONS_00007296 other upstream 336766 349113 ~ 351701 (-) True XLOC_003787
TCONS_00007304 other upstream 447468 459815 ~ 459930 (-) True XLOC_003793
TCONS_00007326 other upstream 911448 923795 ~ 979748 (-) True XLOC_003803
TCONS_00007330 other upstream 1057059 1069406 ~ 1088515 (-) False XLOC_003806
TCONS_00007400 other upstream 3941376 3953723 ~ 3953837 (-) True XLOC_003853

Expression Profile

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