Gene
RNA
| Item | Value |
|---|---|
| gene id | G1977880 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 35604623 ~ 35605077 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2260987 | True | 255 | lncRNA | 0.58 | 2 | 35604623 | 35605077 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505833 | LOC106611286 | coding | upstream | 315459 | 35249319 ~ 35289164 (+) |
| LOC110505832 | mta1 | coding | upstream | 364442 | 35167148 ~ 35240181 (+) |
| LOC100305155 | LOC106611282 | coding | upstream | 503636 | 35088694 ~ 35100987 (+) |
| LOC110505830 | LOC106611281 | coding | upstream | 547679 | 35012695 ~ 35056944 (+) |
| LOC110505824 | snap23 | coding | upstream | 833603 | 34750884 ~ 34771020 (+) |
| LOC110504235 | LOC106611305 | coding | downstream | 259493 | 35864570 ~ 35866787 (+) |
| LOC110505837 | LOC106611304 | coding | downstream | 271366 | 35876443 ~ 35880427 (+) |
| LOC118944336 | NA | coding | downstream | 315798 | 35920875 ~ 35923934 (+) |
| LOC110504338 | LOC106611336 | coding | downstream | 489392 | 36094469 ~ 36097074 (+) |
| LOC110505842 | LOC106611334 | coding | downstream | 496207 | 36101284 ~ 36112211 (+) |
| G1977879 | NA | non-coding | upstream | 8893 | 35595516 ~ 35595730 (+) |
| G1977878 | NA | non-coding | upstream | 11439 | 35592734 ~ 35593184 (+) |
| G1977875 | NA | non-coding | upstream | 19329 | 35585032 ~ 35585294 (+) |
| G1977835 | NA | non-coding | upstream | 29086 | 35530086 ~ 35575537 (+) |
| G1977825 | NA | non-coding | upstream | 80492 | 35523919 ~ 35524131 (+) |
| LOC110504234 | LOC106602716 | non-coding | downstream | 3042 | 35539797 ~ 35611701 (+) |
| G1977911 | NA | non-coding | downstream | 63934 | 35669011 ~ 35669299 (+) |
| G1977916 | NA | non-coding | downstream | 76199 | 35681276 ~ 35681779 (+) |
| G1977919 | NA | non-coding | downstream | 80480 | 35685557 ~ 35685788 (+) |
| G1977924 | NA | non-coding | downstream | 88339 | 35693416 ~ 35693648 (+) |
| G1976689 | NA | other | upstream | 873312 | 34730027 ~ 34731311 (+) |
| G1976680 | NA | other | upstream | 900729 | 34701980 ~ 34703894 (+) |
| G1976575 | NA | other | upstream | 1122702 | 34481519 ~ 34481921 (+) |
| G1976574 | LOC100194703 | other | upstream | 1123344 | 34480904 ~ 34481279 (+) |
| G1976573 | LOC100194703 | other | upstream | 1123726 | 34480030 ~ 34480897 (+) |
| G1978080 | NA | other | downstream | 421456 | 36026533 ~ 36027737 (+) |
| LOC110505847 | LOC106611313 | other | downstream | 784194 | 36376220 ~ 36824709 (+) |
| LOC110504241 | dnah14 | other | downstream | 1613184 | 37161387 ~ 37222396 (+) |
| hivep2b | LOC106611354 | other | downstream | 1659703 | 37264780 ~ 37311200 (+) |
| G1980026 | NA | other | downstream | 2116057 | 37721134 ~ 37729904 (+) |
