G1983484


Basic Information

Item Value
gene id G1983484
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 41408294 ~ 41408540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2267633
gagctctccaaccctgttcctgtagctacccagtactctgtctGCCGTgggctctcctaccctgttcctgtagctacccagtactctgtctGCCGTgggctctcctaccctgttcctgcagctacccagtactctgtctgccgtgggctctccaaccctgttcctgtagctaTTTCGTAgttaaaggtaatgtgtcagcctattatTTATGAGATATTTAGTAgttaaaggtaatgtgtcagcctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2267633 True 247 lncRNA 0.50 1 41408294 41408540

Neighbor

gene id symbol gene type direction distance location
LOC110504259 LOC106603281 coding upstream 57545 41297432 ~ 41350749 (+)
si:ch211-132f19.7 LOC106611404 coding upstream 517182 40868101 ~ 40891112 (+)
dnajc27 LOC106611405 coding upstream 548240 40829046 ~ 40860054 (+)
pomca LOC100510783 coding upstream 585468 40819696 ~ 40822826 (+)
snx9a LOC105031565 coding upstream 666555 40689188 ~ 40741739 (+)
LOC110505965 trim9 coding downstream 138831 41547371 ~ 41622795 (+)
LOC110505964 LOC106611459 coding downstream 227616 41636156 ~ 41666062 (+)
LOC110505960 LOC106611458 coding downstream 268804 41677344 ~ 41737128 (+)
LOC110505959 LOC106611457 coding downstream 331633 41740173 ~ 41757394 (+)
LOC110504274 LOC106611444 coding downstream 372731 41781271 ~ 41937779 (+)
G1983481 NA non-coding upstream 1374 41406572 ~ 41406920 (+)
G1983480 NA non-coding upstream 1830 41406217 ~ 41406464 (+)
G1983479 NA non-coding upstream 13605 41392999 ~ 41394689 (+)
G1983474 NA non-coding upstream 42801 41365266 ~ 41365493 (+)
G1983473 NA non-coding upstream 43364 41364684 ~ 41364930 (+)
G1983488 NA non-coding downstream 10677 41419217 ~ 41419507 (+)
G1983483 NA non-coding downstream 13090 41421630 ~ 41425987 (+)
G1983493 NA non-coding downstream 32731 41441271 ~ 41441519 (+)
G1983498 LOC106611479 non-coding downstream 42898 41451438 ~ 41453063 (+)
G1983514 NA non-coding downstream 76774 41485314 ~ 41485839 (+)
G1983387 NA other upstream 191542 41215475 ~ 41216752 (+)
G1983277 NA other upstream 360392 41047551 ~ 41047902 (+)
G1982355 NA other upstream 1017887 40389658 ~ 40390407 (+)
LOC110505902 LOC106611388 other upstream 1854802 39543907 ~ 39557667 (+)
G1983499 NA other downstream 39862 41448402 ~ 41449340 (+)
G1983721 NA other downstream 654485 42063025 ~ 42103896 (+)
G1983777 NA other downstream 823700 42232240 ~ 42232904 (+)
G1983836 NA other downstream 853687 42262227 ~ 42262714 (+)

Expression


Co-expression Network