G1983514


Basic Information

Item Value
gene id G1983514
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 41485314 ~ 41485839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2267667
GAAGCAGTATTCACAGTGCGCTCCTCTCTCATTCACCGTCAGGACGTAGGAATAGGCAGGACAGGCAAACACGAGGTCTCCGACAGCGAAGTGCTTCACAGCCCGTAGTCCCCTGCCTTTCCCCGGGCTAGCGAACCTCTCCGTCCCCGCTATTCCCTCGTTCTTCATTAAGCCATTCATCTTCAATGCCTCTCACCAATACCAAACGGCAAGGCTAACTAGCCTAGCATCATATGGTTAGCTTGTCACTTCTACGACCAGTCCTTGCCTACGACACATTGAACTACAGG

Function

NR:

description
N-lysine methyltransferase SMYD2-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2267667 True 290 lncRNA 0.53 2 41485314 41485839

Neighbor

gene id symbol gene type direction distance location
LOC110504259 LOC106603281 coding upstream 134565 41297432 ~ 41350749 (+)
si:ch211-132f19.7 LOC106611404 coding upstream 594202 40868101 ~ 40891112 (+)
dnajc27 LOC106611405 coding upstream 625260 40829046 ~ 40860054 (+)
pomca LOC100510783 coding upstream 662488 40819696 ~ 40822826 (+)
snx9a LOC105031565 coding upstream 743575 40689188 ~ 40741739 (+)
LOC110505965 trim9 coding downstream 61532 41547371 ~ 41622795 (+)
LOC110505964 LOC106611459 coding downstream 150317 41636156 ~ 41666062 (+)
LOC110505960 LOC106611458 coding downstream 191505 41677344 ~ 41737128 (+)
LOC110505959 LOC106611457 coding downstream 254334 41740173 ~ 41757394 (+)
LOC110504274 LOC106611444 coding downstream 295432 41781271 ~ 41937779 (+)
G1983498 LOC106611479 non-coding upstream 32251 41451438 ~ 41453063 (+)
G1983493 NA non-coding upstream 43795 41441271 ~ 41441519 (+)
G1983483 NA non-coding upstream 59327 41421630 ~ 41425987 (+)
G1983488 NA non-coding upstream 65807 41419217 ~ 41419507 (+)
G1983484 NA non-coding upstream 76774 41408294 ~ 41408540 (+)
G1983536 NA non-coding downstream 27737 41513576 ~ 41520009 (+)
G1983541 NA non-coding downstream 39639 41525478 ~ 41525764 (+)
G1983542 NA non-coding downstream 39988 41525827 ~ 41526190 (+)
G1983543 NA non-coding downstream 41064 41526903 ~ 41527106 (+)
G1983554 NA non-coding downstream 71940 41557779 ~ 41558880 (+)
G1983499 NA other upstream 35974 41448402 ~ 41449340 (+)
G1983387 NA other upstream 268562 41215475 ~ 41216752 (+)
G1983277 NA other upstream 437412 41047551 ~ 41047902 (+)
G1982355 NA other upstream 1094907 40389658 ~ 40390407 (+)
G1983721 NA other downstream 577186 42063025 ~ 42103896 (+)
G1983777 NA other downstream 746401 42232240 ~ 42232904 (+)
G1983836 NA other downstream 776388 42262227 ~ 42262714 (+)
cn112 cn112 other downstream 933321 42419107 ~ 42454007 (+)

Expression


Co-expression Network