spag7 (spag7)


Basic Information

Item Value
gene id spag7
gene name spag7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31646573 ~ 31652210 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591307.2
GCATGCGTATTCCCTCCCCACGAATGATTTTAAACATCATGCTTCCGGTAGTGATCATTCAGTCCAAAATGGCGGACCTCCTGGGCTCAATTCTGAGTTCGATGGAAAAACCTCCCACAGTCGGCGACAAGGAGAGCCGACGAAAGGCCCGAGAACAGGCAGCAAGAATGAAGAAGATGCAGGAGGATGAGAAGAAAAAGAAAGCCGAGTTCAGGAAACGGATGGAGAAAGAGGTGTCAGAATTCATTCAAGACACTAAGCAACAGAAGAGGAAGTACAATCCCATGGGAAAGATTGAAAGGAGCATATTGCATGATGTAGCAGAAGTCGCTGGTCTGGCATCGTTTTCTTTCGGAGAGGATGAGGAAAGCAGATACGTCATGATTTTTAAGAAGGAGTTTGCTCCATCAGACGACGAGCTGGAGGCTTATCGGAAAGGAGAGGAGTGGGACCCCCAAAAAGCTGAATACCGCCGCAGACTTAAAGAGCAGGCTGCGTTAGAAGAGGAGACCACCGGTAAGACACAGAAGAGGGCAGCGTCTCCCAGCTCCAATTACCGTGACAAGTACAGCCATCTGATCGGCACCTCTTCTGCTAAGGATGCAGCACATACGCTAGAGGCCAACCAGGCATATGGCATGGtaccTGTGGCCAACAAAAGGGACACCCGCTCCATAGAGCAGGCCATGAATGAGATTCGGGCCAAGAAACGTCAGAAGACAGGAGATGAAGACACCGGGGCAGGGAGCACCTCCACCTCTTGAGAGGGCttttgcgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaaagagagAAAACAGCAGTTAGTCTGAGTGTAAAAGTGAGACAACGTATGAGGGGCACAGAGGGAGTACCTCAAATCTGTATTAACCTACAGGAGGCCTACTACATTGAAAGATCCTACATGTTTCCCAGGACATATACAGTAGGTGAAACTTGTGGGTATGTAAGGAAGGTTCTTGAATTATGTTTCTCCTCTGTCCTTGACTCGGGTTGACTGTTTTTATGTTCCAACCAAATTGGTCGTGTGGAAGTCTGATTAAGGGCATTTTGTCTATTGGCTTTCTTTCTGTCTACCCCAAAGTCCTGTAATTTCTCCCACACAAAGTCATCCTTTTTCTCAGTGAACGTAAAGAGGAGAGTAGCACAACCATGAGGGGCAACAGTAGGTTGCCGGTAGATTCGCATTTGTCTGTTTTCACCTTTACGAGGAAAATAATTCCTATTGTGACATATCGTGGCAGTTAGGAGTTACAGGATATGTTTTTATTCTATTTGTTTTTAGCTACATTGTGGGCTCTATTCAGTCTCatcgctgaagcgttacagattacCTGATAGAAAGGTCATTTCAgattgagctgacatatgcagcgtttactgtgaatgcagtctctgctaaaTGTCAGTCACGCTGTACCCACTtggacacacactggttgaaccAATGTcttttccacgtcatttcaatgaaattacgttgaaccaatgtggaatagatgttgaattggcGGCTGTGCCCAGAGGGTAACACTGAACTTCTGCAGTACGgcttgaatagagccctaagtctTTGTTCTCAGGCCCATATAGTGTTTCCATCCCACAAATGAAAAGTGAATGGAGGCTGAAGATATCATTTGAGAATGAAACCACTGCAGTTTGTAGGCCTACATGGTAGATATACTAGCAAACATCAAGTtgatgatgattacatttctggGGTCATATTCATGGGGAAGTGTCTCATTTAGAGACGCAAAGCACTGTTTGAATCTCACTGTCTATAAATCATTGTTACCTTCAGCAAATGTAATACAGCTCTGCTCCGTTGTGTAGTCTGGTCAAACTGAATCAGTCACATTTTTAAATGAGGATTGAAATAAGTGTCCTATGCTATGTGGACAATGCTGTGTTGTCAATGTTTTATTCTATGCGCTCTTTCACTTGCTCAGTGTGTAAAGATGTTGGCATGATGGCATCTAGCTGTAACCATTTTAATCCCTTTGTTTCCTGTATGTTTTAATAAATTGGGAGAAATGTTGATTTAA

Function

symbol description
spag7 Predicted to enable nucleic acid binding activity. Orthologous to human SPAG7 (sperm associated antigen 7).

NR:

description
sperm-associated antigen 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591307.2 True 2075 mRNA 0.44 7 31646573 31652210

Neighbor

gene id symbol gene type direction distance location
LOC110510029 LOC106563422 coding upstream 6296 31622705 ~ 31640277 (+)
ephb4a LOC106603099 coding upstream 159457 31437057 ~ 31487116 (+)
LOC110509418 LOC106563427 coding upstream 202833 31237429 ~ 31443740 (+)
mepce LOC106563428 coding upstream 415042 31226337 ~ 31231531 (+)
her1 LOC106603184 coding upstream 427596 31217958 ~ 31218977 (+)
chrdl2 LOC106563420 coding downstream 1267 31653477 ~ 31659720 (+)
neu3.1 neu3 coding downstream 26861 31679071 ~ 31682119 (+)
st14b LOC106563416 coding downstream 37936 31690146 ~ 31701571 (+)
LOC110509421 LOC106563415 coding downstream 49488 31701698 ~ 31723025 (+)
napaa napa coding downstream 109079 31761289 ~ 31771774 (+)
G2175240 NA non-coding upstream 1611 31641604 ~ 31644962 (+)
G2175213 NA non-coding upstream 54400 31584796 ~ 31592173 (+)
G2175183 NA non-coding upstream 79241 31566955 ~ 31567332 (+)
G2175166 NA non-coding upstream 89687 31556636 ~ 31556886 (+)
G2175165 NA non-coding upstream 90240 31556019 ~ 31556333 (+)
G2175264 NA non-coding downstream 17091 31669301 ~ 31669946 (+)
G2175265 NA non-coding downstream 19305 31671515 ~ 31671824 (+)
G2175281 NA non-coding downstream 55855 31708065 ~ 31708276 (+)
G2175282 NA non-coding downstream 56323 31708533 ~ 31708759 (+)
G2175314 NA non-coding downstream 153831 31806041 ~ 31806768 (+)
G2175233 psmb6 other upstream 35104 31610544 ~ 31611469 (+)
G2174785 NA other upstream 328196 31317837 ~ 31318377 (+)
LOC110510022 LOC106563433 other upstream 822429 30817845 ~ 30824144 (+)
G2173841 LOC106563447 other upstream 1178449 30463942 ~ 30468124 (+)
G2173761 LOC106563448 other upstream 1305882 30336852 ~ 30355090 (+)
LOC110509422 LOC106563560 other downstream 248771 31820484 ~ 31908546 (+)
G2175413 NA other downstream 384837 32037047 ~ 32037736 (+)
LOC110509425 LOC106563572 other downstream 469560 32115629 ~ 32150579 (+)
cxxc5a LOC106563628 other downstream 1570607 33212994 ~ 33235535 (+)
LOC110510125 LOC106563697 other downstream 2478801 34105921 ~ 34135553 (+)

Expression


Co-expression Network