st14b (LOC106563416)


Basic Information

Item Value
gene id st14b
gene name LOC106563416
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31690146 ~ 31701571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591313.2
TTTATTTCCTCGTTCGTCTCTATTCAGTCAGTAGCCTTCACCCCCACTGTTCAGTGTATCACCTGTACACAGGAAGTCGAATGGATAGGCGGCTTGGTTTCTGTCTACAATAGGCTTAATATCGACATTTTTTTTAGTTACACTAAATAAACACAAATTAGTGTCGGAATTAATTAACTTTTCGGTTGTTCTGATATCCTTCGGAATACTTTCTATAGGGGAAAAATGACAACCAATTCGTAATGACTGGTGTGGATTTACCTGCGAGACACCTGTCGCTGTTGCCATCCTATTGAAGACAATGGACCGAGGCTGTCGATAATCATTCTAAAGGCTTGTAGAATTTGACCGAGACTAGACAAATAATTAAAAATTTCAAGCACAGTGAAATCCAATTTGGATCAATTTCCAAACGTGACGTTCTTCTGTCATGGATTTGTTGGATTCTGGAACGAAGTTTACCCCGAAAACGCAGGATGATGACTGGGAAAATTCTGTCACATTCTTGCCAGCCCCAGACACCAAGAAGCTGGAGAAAAATAGAGGGAGTAAAACACTTTTTGTTGGGATTGGCCTCGTGGGGTTGGCAGCAGTCATTGCGCTGACGACAGGCCTGCTGGTTTGGCATTTTCACTtgaggagaggagaggtgcgaTTGACAAAGATGTACATTGGCTCTATGAGTATCACCAACCAAAGATTTATAGATTCCTACGACAACCCCAACAGCAATGAGTTCAAACAACTGGCCATGCAGGTGTCACAGCAGCTGAAGGGAATCTACTCTAAATACAAAGATCTGGATAAATATTTAGTGGGATCCACAGTGCAAGCCTTCAGTGAAGGCAACAGAGGGAGTGAGGACAATGTAGTGGCCTACTACCTGTCTGAGTTTGATGTACCGATCGGTCGGGGGTCTGCAGTGGATGAAGCTATTGGCACCATGGATCCGATGGAGGGAAGTCTGAAGGGGAGGATGGGGAAGGGTCGCCGGCCAACCAGCTCCCTGCTCATCAACAACGTCATGTCTGGAGCTCTGGATGCACGTATGACAAAGGCCTTATTGACTGCCTCCCAAACCTATTCCTATCACATCAGTGAGAATCACACGGCCACATTACAGTCACCTGGCTTTCCTGATTCTCCATACCCTCCAAACACATATGTGTTGTGGAGACTACATGCTGACCGAGGCTACAGGATTAAACTGGAGTTTGACACCTTCAACTTGGAGGCTGACTGTCAGAACGACTTCATCAAGGTGTATGACTCCCTGGTGCCATTGGAGCAGAAGGTCATGGCAGAGAAATGTGGATATTACACTCGCAATGAGCCACTGTCGTTCATTTCCTCTGGAAACGTCATGCTGCTGACACTGGTAACCAACAAGGAGAAGAACTTCCCTGGCTTCAGAGCCACCTACTCTCAGGTTCCCCTCAATAGCCAAGATTGTGGTGGTCAATTATCAGGACTTAATGGCACCTTCACATCTCCAAACTTTCCCTCCCATTACCCACCTCTGACCAAGTGTGTCTGGGATATTGAGGTCCCAAAAGGGAAGTCTGTCAAGGTGCAGTTCAACAAGCTGTTGATGTCTGAGCCAGGACAGAACAGTAATAATTGTCCTAAGGACTACGTAGAGATCAACAGTGAAAAGCTATGTGGCGATAAGCCCTACAGCACTGTGGTCACCAGCACAGTCAACAAGATAGTCGTGATATTTAACTCTGACATGTCCTATGTGGATTCAGGTTTCACTGCTGAGTTTGAAGCCTTTGTGCCAACTACTCAGTGTGagccagatcaaatcaaatgtagaaATGGTCTTTGTAAAGTCAAGTTCTGGCAGTGTGATGGAGTCAATGACTGTGGGGACAGCACAGACGAGGAAAACTGTGGGAGTTGTAAATCAGGTGAGTTTACCTGTCGGAATGGAAGCTGTATctccgagagactgaaatgtgaTGGCCGTGCTGACTGTGCTGACGGCTCTGATGAATCAAATTGCGCAAAATCTCTAGCCCTGCAATGCTCAGAGTATACTTACAAGTGTAAGAACAACATGTGCATCAGCAAGCTGAACCCAGAGTGCGATGAAGAAGAGGACTGTGATGATGGCTCAGACGAGGCAGACTGTCagtGTGGTATACGGCCTTATAGACACTCCCGCATTGTGGGTGGACAGGCCTCCATTGAGGGGGAGTGGCCCTGGCAGGTTAGCCTTCACATCCGAGGGTCTAGCCATGTGTGTGGAGCCTCAGTTATCAACGACCGCTGGCTCGTCACTGCTGCCCACTGTGTCCAGGATGACGTCAAAGTCAAATATTCTCAACCTCAACAATGGGAAGCATACCTTGGACTTCATGTTCAGAGTCAGACTAACAAGTGGACGCTGAAGAAGAACCTTAAACAGATCATCCAGCACCCTGGCTACCAAGCCCAGACTTATGACAATGACATAGCTCTTATGGAACTGGACAGTCCTGTCACACTCAACCAGAACATCTGGCCAATCTGTCTGCCCACGGCCAGGCATTACTTCCCTGCTGGCAAGCCAGTGTGGATCACTGGCTGGGGGACCACCAGAGAGGGGGGTTTCGAGGCATCAATGTTGCAGAAGGCAGAGGTCCGTATCATCAATGCCACAGTATGTAACACCCTAATGGAAGGACAGACCACTTCCAACATGTTATGTGCTGGTGTACTGGACGGAGGAGTAGATGCCTGTCAGGGAGACTCTGGAGGTCCGTTGTCCTCCATGGAGAACGGTGGACGTTTCTTCTTGGCTGGAGTGGTGAGCTGGGGGGACGGCTGTGCCCGCAGGAACAAGCCTGGCGTCTACACCCAAGTCACCAAATACAGGGACTGGATAAAGCAGAAGACCGGAGTGTAGCTGAGAAGACCAGGGTCTAGCTGAGTGGGAAACCTGATAAAGCAGAAGACCGGAGTGTAGCTGAGAAGACCAGGGTCTAGCTGAGTGGGAAACCTGGTTGTCAAGCCTGAGCAATACTTAGCCCGCAGAAGATTGGTCTTTGTCCAAGTTCTTAAAATCCTCAGACCTTTGATTGGTATGCATtaaggttattatagtaaactaatgcagaaactaaaacaaaaatTAATCTTGAAAAAACGATTTagtaaattgaaataaaataatgaacaAACCTGTTTCAAAAAactaaaactatactgaaacgattatctttgactccaaaactaaataaaataaaataaaaaccataATGAGTTATGTTCAGTTGTAGTTTTTTTCTAAACTTCTGATtgggttttcaatggggttcaaagGTGGATGAAGGCTGCAACTGATACCTGACAAATGTATGCACTCAATAccctaagtcgctctggataagagaatttgctaaattactcaaatgtaaatgtaaaacagTTGTGAAGCTTTAGGGGGGGGTTTAAGCTACTGAATCTGGTGGGTAAATGCTTCCAGGAGATGGTGATGTTTCAAATAGGCCTAGTTTGTGCATCACTATCCctagctatcactagctaacaGGGGAAAAAAAGTCTAGGTAACTAACTTGATTCCTCTTACATGTACTACTACGTTTTTAAAAAGCACTGGATATATGGGGTTTCCTTCTACATTATTATTTTTCACCAGTCTCAGCTCTATTACCTTTAAATCCAAGTCACAATGAGATTGACTTTATAATATAAACCTATCCTATGAGCTGACCCATCACCTTGTGTATAACTGCCCGTGGTCATGTAAAACTATGTAGAACTATTTCACACTGGGAATATTTTTACAGTGTGAAACATTTTTACCTTCAGTGGTAAGAAGTGACATCCCAAAAACAACACACATGCTATACAACCCAAATGGCTCATAGCAATactaaaactgaaactaaataaTATAAAAACTAAATATACACATTTCTAGCAAATTCAAACTAAATAACAAACTAGCAAATCAGGTCCGAAAACTAACTTAAAATAAAATGAATTTCAAATGTAAATTTTTTTAACgaatataaaaaaaaactaatttaaaaacaaaactataataaccttggtatGCACACTACAGTATGTGACTACTGGGACTCTACAAGGAGTTTTCATGATTTTACACTTATGTTGTAAATGGTGTTTGGTTCTATCCAAAAGTATTACTTTATACAGAATATACCATTCTTACATACTTATACATACACTTACTTAAAAATAGACTGGGCATTACATTAGCTGTGTTATTATCTTGCTTAAATAAATATTTAGTAAGCATTGGTTGCAGGTTAAAGACGGATTTTTGCACCCAAGTGCATTAAATTGCCTGCTTTTGTGACCTTGTGGGCATTTTTCCACCCTGGGTTTCTTTATGTAGAATTTGCTTTGTTCATGTGTTAGAATCCTTATCCTTACATTGCCTAGGCAATCGTTTGTTTTTCCAAAAGTGATATGTTATATGAAGTTTTGTGGATTCTTAAAATCTCATATGTCTTTGTATTTTTATATTATGTTTTGTTAATGTAGGTGTTTTCTTTTTAGGATATGTTTTCATTtcctgtttatatttattttttaattgatcTTCAGACTGCTGTACCTCAGTAAACGTGACAGCTTGTGtacctgattttttttttactgtctaATATGCTCTGAGATGTTTCTGAGATACCATACGACTAAAAATGACTGTCCTGGGTACTTAGTTAATGGTTTGATTGAACAGGGAAATGGTAAAGGAAAATATTTCACATATTCAGAGAGCTATACTTTACACATTTTAGAAATGAATTAAGGTATTTTGTGATTTTATACTAAACTCAGTTCATTGATTTTTATATTTTCTTCCCGAGACATATTTAAATTTGTAAACAATATGTAAATGTCATAGAGCATAGAGAGCTTTTGGTGTGTAATATATTTCTGGTTTATATTATGTCAATATGGTTGGTTGCTTGGTCCTTGTCTAGGTTTATACATTAGTTGAAAGTACATCTCATTGCTCCTCGTACACATTTTAACAAGTGATGTTAACATTACTATGgcagcgtttacacaggcagcccaattctgatctttttttcccCCAGTAATTGGTGTTTAGAAAAGATCTGATTGCTCAAAAAAGGAAACAAATATCAAAATggcctcttttttttttaaagcagcctATATACTCTGTTCTATGTATCCATTCCATTCTGGTGCTTACAGGATATCATTAATTAGTTGttgtatgtaaattagatatttttttCTTGTGTACAGTTTAGGAAATTTTTATTGATCATTTTAAAACGCGTATGTTGTGTGAGTGTCAAGCTGGGCTTGTAATACACAAAGGCCTAGTAACAACACCAAAAAGACTTGTACTCGCGTATTTGTGGAATTTCAGGGTCCTGACAACCTGTGCTTTTACTTGAGTTTGTGATTATTGTAATGTACTTTACAGTAATTTCACCATTCTCTGAACATTTTAGATTGTGGGAGTGCCAATGTGCCTTATTTCAGTGTAATTCTATGTAAAGACTAGTTTCATATTAAATTACAATACCCTGTATGATTGGGGAAATGA

Function

NR:

description
suppressor of tumorigenicity 14 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591313.2 True 5575 mRNA 0.41 18 31690146 31701571

Neighbor

gene id symbol gene type direction distance location
neu3.1 neu3 coding upstream 8027 31679071 ~ 31682119 (+)
chrdl2 LOC106563420 coding upstream 30426 31653477 ~ 31659720 (+)
spag7 spag7 coding upstream 37936 31646573 ~ 31652210 (+)
LOC110510029 LOC106563422 coding upstream 49869 31622705 ~ 31640277 (+)
ephb4a LOC106603099 coding upstream 203030 31437057 ~ 31487116 (+)
LOC110509421 LOC106563415 coding downstream 127 31701698 ~ 31723025 (+)
napaa napa coding downstream 59718 31761289 ~ 31771774 (+)
hnrnpul1l hnrl1 coding downstream 88261 31789832 ~ 31799471 (+)
im:7138535 LOC106563406 coding downstream 98284 31799855 ~ 31804031 (+)
LOC110510048 LOC106563405 coding downstream 113090 31814661 ~ 31820238 (+)
G2175265 NA non-coding upstream 18322 31671515 ~ 31671824 (+)
G2175264 NA non-coding upstream 20200 31669301 ~ 31669946 (+)
G2175240 NA non-coding upstream 45184 31641604 ~ 31644962 (+)
G2175213 NA non-coding upstream 97973 31584796 ~ 31592173 (+)
G2175183 NA non-coding upstream 122814 31566955 ~ 31567332 (+)
G2175281 NA non-coding downstream 6494 31708065 ~ 31708276 (+)
G2175282 NA non-coding downstream 6962 31708533 ~ 31708759 (+)
G2175314 NA non-coding downstream 104470 31806041 ~ 31806768 (+)
G2175316 NA non-coding downstream 109972 31811543 ~ 31811774 (+)
G2175318 NA non-coding downstream 111248 31812819 ~ 31813213 (+)
G2175233 psmb6 other upstream 78677 31610544 ~ 31611469 (+)
G2174785 NA other upstream 371769 31317837 ~ 31318377 (+)
LOC110510022 LOC106563433 other upstream 866002 30817845 ~ 30824144 (+)
G2173841 LOC106563447 other upstream 1222022 30463942 ~ 30468124 (+)
G2173761 LOC106563448 other upstream 1349455 30336852 ~ 30355090 (+)
LOC110509422 LOC106563560 other downstream 199410 31820484 ~ 31908546 (+)
G2175413 NA other downstream 335476 32037047 ~ 32037736 (+)
LOC110509425 LOC106563572 other downstream 420199 32115629 ~ 32150579 (+)
cxxc5a LOC106563628 other downstream 1521246 33212994 ~ 33235535 (+)
LOC110510125 LOC106563697 other downstream 2429440 34105921 ~ 34135553 (+)

Expression


Co-expression Network