G2175316


Basic Information

Item Value
gene id G2175316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31811543 ~ 31811774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2486307
tgagtcaacagggtcaatagaaggtaggctctgagggtcaggtttgacacgttcctgaataacagagcaacacctgagggaatggcatctaaaacaattgcaaaatctttaggtgttacagggaccttgtaaagtgataagaattctttataactgagtaaaataCCCTCTGcctttaccagttggctcaccaataggatattatttcagaaccaatattctaaaaacaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2486307 True 232 lncRNA 0.39 1 31811543 31811774

Neighbor

gene id symbol gene type direction distance location
im:7138535 LOC106563406 coding upstream 7512 31799855 ~ 31804031 (+)
hnrnpul1l hnrl1 coding upstream 12072 31789832 ~ 31799471 (+)
napaa napa coding upstream 39769 31761289 ~ 31771774 (+)
LOC110509421 LOC106563415 coding upstream 88518 31701698 ~ 31723025 (+)
st14b LOC106563416 coding upstream 109972 31690146 ~ 31701571 (+)
LOC110510048 LOC106563405 coding downstream 2887 31814661 ~ 31820238 (+)
LOC110509422 LOC106563560 coding downstream 8710 31820484 ~ 31908546 (+)
LOC110510049 LOC106563630 coding downstream 112448 31924222 ~ 31927459 (+)
LOC110510050 LOC106563631 coding downstream 117396 31929170 ~ 31930830 (+)
LOC100136774 tgf coding downstream 120027 31931801 ~ 31936995 (+)
G2175314 NA non-coding upstream 4775 31806041 ~ 31806768 (+)
G2175282 NA non-coding upstream 102784 31708533 ~ 31708759 (+)
G2175281 NA non-coding upstream 103267 31708065 ~ 31708276 (+)
G2175265 NA non-coding upstream 139719 31671515 ~ 31671824 (+)
G2175264 NA non-coding upstream 141597 31669301 ~ 31669946 (+)
G2175318 NA non-coding downstream 1045 31812819 ~ 31813213 (+)
G2175327 NA non-coding downstream 21588 31833362 ~ 31833571 (+)
G2175329 NA non-coding downstream 26528 31838302 ~ 31838568 (+)
G2175330 NA non-coding downstream 27013 31838787 ~ 31838992 (+)
G2175233 psmb6 other upstream 200074 31610544 ~ 31611469 (+)
G2174785 NA other upstream 493166 31317837 ~ 31318377 (+)
LOC110510022 LOC106563433 other upstream 987399 30817845 ~ 30824144 (+)
G2173841 LOC106563447 other upstream 1343419 30463942 ~ 30468124 (+)
G2173761 LOC106563448 other upstream 1470852 30336852 ~ 30355090 (+)
G2175413 NA other downstream 225273 32037047 ~ 32037736 (+)
LOC110509425 LOC106563572 other downstream 309996 32115629 ~ 32150579 (+)
cxxc5a LOC106563628 other downstream 1411043 33212994 ~ 33235535 (+)
LOC110510125 LOC106563697 other downstream 2319237 34105921 ~ 34135553 (+)

Expression


Co-expression Network