hnrnpul1l (hnrl1)


Basic Information

Item Value
gene id hnrnpul1l
gene name hnrl1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31789832 ~ 31799471 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591325.2
GTTGTTCAAATATTACCTACAAGGCCTCTAGCCAATCACAGAGCAGACGGCAAGCGCTAACCTTTTCTGGCTACAACAGAATCGTCCATTTTGTTTCAGTTGAGTTGGTCGCTGCATGAATCAAGCAAGGAAATTATAAGAGTGAGAAAAGAGATTGGAATTTCTGATCACTGAATAAGTTGCATGAAAGATGAGTGGAATCAATGTGAAGAAGCTCAAAGTCAATGAGCTGAAAGAGGAACTTCAGCAGCGAGGCCTGGATACTCGTGGGCTGAAGGCGGATCTTGTCATAAGGTTGCAATCAGCACTTGAGGCCGAGGCTGCAGGTGAAGAGGGCGGGCCACCGACTGCTGATGTTGGGGGGGATGAGGAACACGATATTGGCGCAGATGGCGACGACTACTCAGATGAAGTTAAAGATGATGGGGAAGAAGACCAAGATGGTGAGGACGATGAAGTACAGTTTGTCCCGCAGGCTAAAGAAGAAAAGTTTAATGAGGAGAAAGGTGATGGTGAACATAGTGAAGATGAGCAGGAAGAAGACAGCCGGGATGGGGCACAGGAAGACAGCCGAGAAGGGGCACAGGTGTTAGAACCAGAGAGAGCAGAACCAGAGATGGAGGAACCAGAGCCACCACAACCAGAACCTGTGCAACCAGTACTTGTGCAATCAGAGCCACCACAACCAGAGGCTATGAAACCTGAATCAGTGCAACCTAAGCCAGTGGACCCAGCATCAATTGAGCCTGAAGCAAAGTGTGTGGAGATGTCTGAAATTAAGTCAGATGAGTTTGTGATGAAAGCAGATTTGAAAAAAGAGGCAGATGAACCTCTGCAGCAGGAGCAGTTGAAGAAGGAGCCAAAGCAGCCAGAGGCACATCTTCCAGATGCTGCCAATGAATGCGAGGCCATGGAGGCTGAGCAGGTGAGCCAAGCAAAAACGGAGGATGACCGATGCAACCGTAAGAGGCCATACGATGAAGGCCGTGGCTATGGCTATTATGAACACCGAGAGGAAAGAAGGGCACGTTCTCCACAGCCCCcagcagaggaagaggaagaagatttTGATGACACTCTTGTGGCTATTGATACGTATAATTGCGATCTGCACTTCAAGGTATCACGTGACCGGTATAGTGGATACCCGCTCACCATCGAAGGTTTTGCATACCTGTGGTCAGGTGCACGAGCTTCCTATGGTGTCAACAAAGGGCAAGTCTGCTTTGAAATGAAGATAAACGAGGAGATCTCTGTGAAGCACCTTCCCAGCAGTGAGCCTGATCCACATGTAGTGCGCATTGGCTGGTCCTTGGATACCTGCAACACCCAGCTCGGTGAAGAACATTTCTCTTATGGCTATGGAGGAACTGGCAAGAAATCTTCAAATTGTAAATTTGAGGATTACGGGGAAAAGTTTAGTGAAAATGATGTCCTTGGATGCTACATTGACTTCGATAGCGGTGAGGAAGTGGAGATGGCCTTCTCAAAGAACGGCAAGTGGCTGGATGTGGCCTTCCGTGTGTCACGGGAGGAGTTAGCTAAACAGCCACTCTTTCCCCACGTTCTTGTGAAGAACTGTGCAATTGAATTTAACTTCGGCCAGAAAGAGGAGCCCTTCTTCCCCCTGCCTGAGGGATACACCTTCATTCAGAACGTCCCTCTGGAAAACAGGATACGGGGAACAGTTGGGCCTGCAACCAAGGCTGACTGTGAGCTCTTGATGATGGTTGGCCTGCCTGCATCTGGGAAAACCACCTGGGCCTCAAAACACGCGACAGAGCACCCTGCAAAGAAATACAACATCCTCGGCACCAATGCCATAATGGAGAAGATGAAGGTGATGGGACTGCGTCGTCAGAAGAACTATGCTGGTCGCTGGGATGTCCTGATCCAGCAGGCCACACAGTGTCTGAACAGGTTGATCCAGATTGCTGCCCGCAAGAAGCGTAACTACATCCTGGATCAGACAAATGTATATGGATCAGCCCAGAGACGAAAAATGCGTCCTTTTGAAGGTTTTCAACGCAAGGCTATTGTAATTTGTCCCACGGACGAGGATTTAAAAGAGCGAACGTTAAAGCGAACTGATGAGGAAGGGAAGGATGTGCCCGATCATGCCGTATTAGAAATGAAAGCCAACTTTGTGCTCCCAGAAGCTGGTGAGTTTCTTGACAACGTGACTTTCATCGAGCTTCAAAAAGAAGAGGCTGACACGCTGGTGAAGCAGTACAACGAGGAGGGCCGCAAAGCCGGCCCACCCCCTGACAAACGCTTCGACAACCGCCAGGGAGGTTTCCGTGGTCGCGATGCACCTTATCAGCGCTATGACAACCGTGGTGGCTCccaaggaggaaggggaggctaCCAGAGTCGTGGTGGACCCCAAGGTGGCAACTTCAGAGGAGGCTATAACCGTGGAGGCTACCAGCAGAACCGTTGGGGAGGCAACCGGGATGGCGCAGCAGGAGGGCAACATGGCTACAACCGCAACCAACAATCTGGAGGGAGCTACAATCAACACCGCCAGGGACAATATAACAAGGGAGCCACTGGCAGTTACAGCCAAGGACAGCCACAGACATACAATCAGGGCTATAATCAAGGCTACAATCAAGGCAACTACAACCAAGGTTACAACTACGGCAGCTACAGCCAGTACCCAGGTTACAGCCAGAGCTATAGCCAAactcctgctgctcctgctgccgctgctgctgctcctgccgCCACTGGACAGACCTACAGCCAGCAGCAGCAGAACTACAACCAGCAGTATCAACAGTATGCACAGCAGTGGCAGCAGTATTACCAGAACCAGAGCCAATGGAATCAGTACTACAGCCAATACGGCAACTATGGCAACTACAGCCAGGGTTCTCAGGGCTCCCAGGGCacgcagtaggcctacagtagtgcACTGATGAGACGGATCCATTCCCTGAGCAGCATTCCATTGCTTATCCTGCCTGCAGGCTACACCTGTCTTTTCGTCCTCATCTCCTTAATGATTAGTCTTCCCTTTCTTATAGCTAACATTTTCAAGGTTTTCTTTTCAGGGTCTAGTGGTTTTTCTCCCTGCCTTTCTGGTATAGGATTTATTTTTTCATGTCACGCCACAACATTAGCATTGTTTTTGCAGTAGGTCCTGCAACCATTTAGTAACATTAAGCTTATTTGTCTTGCCTGTTTGTAGACCCTGGCTATTTTAAATGAGCAACAGTGGTGTAGTTTAACATGCATATGTAGTACACTTTTCAGTGTTGTGCAGTGAATGTTTATTAGAGCTCATAAAAGGTAGCTGGGATTTGCATGTGTACATTTCAATGTGTTTTTAAGAGAGATGGAAGATTGTAGGagaacattttgtttttgttttaatatTTTGCTGTTTACGTGTCATTTTTAGTTTTAGATGTTAGATCAAAGAACCATACATTTTAAAGAAATTGGTGTAGAGTCTGGActaattatatatataaaaaaaaaaatgtatcttcaaCTGTTGAGGTTTTGATTTAATCCATTAATATTTTGCCCATATTTATTGAAATTAAAGTCTTGAAGACAAACATTTTGATTACTTTTTTCTATAACCTGTATAAAGAGAGCTTGTAAAACAACATTTACCAAAATGTATTGTTTCACACCATTTAAAACGTTCTGTAACAGTGGTGGTCATCTATTGTCCCTCCAACTTGTTTTTCCAATCTTTGTGATCATTAACTAGTTTCATGTGTGGTTGTAAAACTTTTTTATACCATATACCATGTATGTAAAACAGTATCTGCATGTGGTTCTGTGTTAAATCAAAACTTACTCTTTTTGTATTTGAGAATAAAATCTGAAGACTTTG

Function

NR:

description
heterogeneous nuclear ribonucleoprotein U-like protein 1

GO:

id name namespace
GO:0019013 viral nucleocapsid cellular_component
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K15047 HNRNPUL1, E1BAP5; heterogeneous nuclear ribonucleoprotein U-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591325.2 True 3856 mRNA 0.46 16 31789832 31799471

Neighbor

gene id symbol gene type direction distance location
napaa napa coding upstream 18058 31761289 ~ 31771774 (+)
LOC110509421 LOC106563415 coding upstream 66807 31701698 ~ 31723025 (+)
st14b LOC106563416 coding upstream 88261 31690146 ~ 31701571 (+)
neu3.1 neu3 coding upstream 107713 31679071 ~ 31682119 (+)
chrdl2 LOC106563420 coding upstream 130112 31653477 ~ 31659720 (+)
im:7138535 LOC106563406 coding downstream 384 31799855 ~ 31804031 (+)
LOC110510048 LOC106563405 coding downstream 15190 31814661 ~ 31820238 (+)
LOC110509422 LOC106563560 coding downstream 21013 31820484 ~ 31908546 (+)
LOC110510049 LOC106563630 coding downstream 124751 31924222 ~ 31927459 (+)
LOC110510050 LOC106563631 coding downstream 129699 31929170 ~ 31930830 (+)
G2175282 NA non-coding upstream 81073 31708533 ~ 31708759 (+)
G2175281 NA non-coding upstream 81556 31708065 ~ 31708276 (+)
G2175265 NA non-coding upstream 118008 31671515 ~ 31671824 (+)
G2175264 NA non-coding upstream 119886 31669301 ~ 31669946 (+)
G2175240 NA non-coding upstream 144870 31641604 ~ 31644962 (+)
G2175314 NA non-coding downstream 6570 31806041 ~ 31806768 (+)
G2175316 NA non-coding downstream 12072 31811543 ~ 31811774 (+)
G2175318 NA non-coding downstream 13348 31812819 ~ 31813213 (+)
G2175327 NA non-coding downstream 33891 31833362 ~ 31833571 (+)
G2175233 psmb6 other upstream 178363 31610544 ~ 31611469 (+)
G2174785 NA other upstream 471455 31317837 ~ 31318377 (+)
LOC110510022 LOC106563433 other upstream 965688 30817845 ~ 30824144 (+)
G2173841 LOC106563447 other upstream 1321708 30463942 ~ 30468124 (+)
G2173761 LOC106563448 other upstream 1449141 30336852 ~ 30355090 (+)
G2175413 NA other downstream 237576 32037047 ~ 32037736 (+)
LOC110509425 LOC106563572 other downstream 322299 32115629 ~ 32150579 (+)
cxxc5a LOC106563628 other downstream 1423346 33212994 ~ 33235535 (+)
LOC110510125 LOC106563697 other downstream 2331540 34105921 ~ 34135553 (+)

Expression


Co-expression Network