G2175282


Basic Information

Item Value
gene id G2175282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31708533 ~ 31708759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2486266
agaaacatctcaaggattgtcaatggaaacaggatgcacctgagctcaatttcgagtctcatagcaaagggtccaaatacttatgtaaataaggtattttgcaaacatttctaaaaacttgtttttgctttgtcattatggggtattgtatgtagttGTATTGgtgaaaaaatgtatttaatcaattttagaataaggctgtaacgtaacaaaatgtggaaaagggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2486266 True 227 lncRNA 0.33 1 31708533 31708759

Neighbor

gene id symbol gene type direction distance location
st14b LOC106563416 coding upstream 6962 31690146 ~ 31701571 (+)
neu3.1 neu3 coding upstream 26414 31679071 ~ 31682119 (+)
chrdl2 LOC106563420 coding upstream 48813 31653477 ~ 31659720 (+)
spag7 spag7 coding upstream 56323 31646573 ~ 31652210 (+)
LOC110510029 LOC106563422 coding upstream 68256 31622705 ~ 31640277 (+)
napaa napa coding downstream 52530 31761289 ~ 31771774 (+)
hnrnpul1l hnrl1 coding downstream 81073 31789832 ~ 31799471 (+)
im:7138535 LOC106563406 coding downstream 91096 31799855 ~ 31804031 (+)
LOC110510048 LOC106563405 coding downstream 105902 31814661 ~ 31820238 (+)
LOC110509422 LOC106563560 coding downstream 111725 31820484 ~ 31908546 (+)
G2175281 NA non-coding upstream 257 31708065 ~ 31708276 (+)
G2175265 NA non-coding upstream 36709 31671515 ~ 31671824 (+)
G2175264 NA non-coding upstream 38587 31669301 ~ 31669946 (+)
G2175240 NA non-coding upstream 63571 31641604 ~ 31644962 (+)
G2175213 NA non-coding upstream 116360 31584796 ~ 31592173 (+)
G2175314 NA non-coding downstream 97282 31806041 ~ 31806768 (+)
G2175316 NA non-coding downstream 102784 31811543 ~ 31811774 (+)
G2175318 NA non-coding downstream 104060 31812819 ~ 31813213 (+)
G2175327 NA non-coding downstream 124603 31833362 ~ 31833571 (+)
G2175233 psmb6 other upstream 97064 31610544 ~ 31611469 (+)
G2174785 NA other upstream 390156 31317837 ~ 31318377 (+)
LOC110510022 LOC106563433 other upstream 884389 30817845 ~ 30824144 (+)
G2173841 LOC106563447 other upstream 1240409 30463942 ~ 30468124 (+)
G2173761 LOC106563448 other upstream 1367842 30336852 ~ 30355090 (+)
G2175413 NA other downstream 328288 32037047 ~ 32037736 (+)
LOC110509425 LOC106563572 other downstream 413011 32115629 ~ 32150579 (+)
cxxc5a LOC106563628 other downstream 1514058 33212994 ~ 33235535 (+)
LOC110510125 LOC106563697 other downstream 2422252 34105921 ~ 34135553 (+)

Expression


Co-expression Network