G2175329


Basic Information

Item Value
gene id G2175329
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31838302 ~ 31838568 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2486321
cacacataaatacacatacatacatacacacatacatacacacacacacatacatacatacatacagtggggagaacaagtatttgatacactgccgattttgcaggttttcctacttacaaagcatgtagaggtctgtaatttctatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtaaatcatttgcattttattgcatgacatacgtatttgatcacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2486321 True 267 lncRNA 0.34 1 31838302 31838568

Neighbor

gene id symbol gene type direction distance location
LOC110510048 LOC106563405 coding upstream 18064 31814661 ~ 31820238 (+)
im:7138535 LOC106563406 coding upstream 34271 31799855 ~ 31804031 (+)
hnrnpul1l hnrl1 coding upstream 38831 31789832 ~ 31799471 (+)
napaa napa coding upstream 66528 31761289 ~ 31771774 (+)
LOC110509421 LOC106563415 coding upstream 115277 31701698 ~ 31723025 (+)
LOC110510049 LOC106563630 coding downstream 85654 31924222 ~ 31927459 (+)
LOC110510050 LOC106563631 coding downstream 90602 31929170 ~ 31930830 (+)
LOC100136774 tgf coding downstream 93233 31931801 ~ 31936995 (+)
LOC110510052 spsy coding downstream 105037 31943605 ~ 31992800 (+)
LOC110510053 LOC106563566 coding downstream 164610 32003178 ~ 32021463 (+)
G2175327 NA non-coding upstream 4731 31833362 ~ 31833571 (+)
G2175318 NA non-coding upstream 25089 31812819 ~ 31813213 (+)
G2175316 NA non-coding upstream 26528 31811543 ~ 31811774 (+)
G2175314 NA non-coding upstream 31534 31806041 ~ 31806768 (+)
G2175282 NA non-coding upstream 129543 31708533 ~ 31708759 (+)
G2175330 NA non-coding downstream 219 31838787 ~ 31838992 (+)
G2175310 NA non-coding downstream 3294 31841862 ~ 31845680 (+)
G2175354 NA non-coding downstream 49607 31888175 ~ 31888375 (+)
G2175361 NA non-coding downstream 59157 31897725 ~ 31897994 (+)
G2175362 NA non-coding downstream 60575 31899143 ~ 31899390 (+)
G2175233 psmb6 other upstream 226833 31610544 ~ 31611469 (+)
G2174785 NA other upstream 519925 31317837 ~ 31318377 (+)
LOC110510022 LOC106563433 other upstream 1014158 30817845 ~ 30824144 (+)
G2173841 LOC106563447 other upstream 1370178 30463942 ~ 30468124 (+)
G2173761 LOC106563448 other upstream 1497611 30336852 ~ 30355090 (+)
LOC110509422 LOC106563560 other downstream 62413 31820484 ~ 31908546 (+)
G2175413 NA other downstream 198479 32037047 ~ 32037736 (+)
LOC110509425 LOC106563572 other downstream 283202 32115629 ~ 32150579 (+)
cxxc5a LOC106563628 other downstream 1384249 33212994 ~ 33235535 (+)
LOC110510125 LOC106563697 other downstream 2292443 34105921 ~ 34135553 (+)

Expression


Co-expression Network