Gene
RNA
| Item | Value |
|---|---|
| gene id | G2173843 |
| gene name | LOC106563447 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 30468328 ~ 30468909 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: latent-transforming growth factor beta-binding protein 3-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2484508 | True | 253 | lncRNA | 0.56 | 3 | 30468328 | 30468909 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510009 | LOC106563450 | coding | upstream | 177125 | 30264990 ~ 30291203 (+) |
| zmp:0000001168 | LOC106563451 | coding | upstream | 246216 | 30175504 ~ 30222113 (+) |
| LOC110510004 | LOC106563454 | coding | upstream | 321003 | 30139343 ~ 30147325 (+) |
| LOC110510002 | LOC106563456 | coding | upstream | 332388 | 30129518 ~ 30135940 (+) |
| LOC110510005 | LOC106563457 | coding | upstream | 340801 | 30120517 ~ 30127527 (+) |
| LOC110510020 | LOC106563438 | coding | downstream | 183783 | 30652692 ~ 30669474 (+) |
| LOC110509412 | LOC106563437 | coding | downstream | 223052 | 30691961 ~ 30780818 (+) |
| il13ra2b | il13ra2b | coding | downstream | 317835 | 30786744 ~ 30804819 (+) |
| LOC110510022 | LOC106563433 | coding | downstream | 348936 | 30817845 ~ 30824144 (+) |
| LOC110510024 | LOC106563431 | coding | downstream | 452579 | 30921488 ~ 31017638 (+) |
| G2173840 | LOC106563447 | non-coding | upstream | 5307 | 30458174 ~ 30463021 (+) |
| G2173832 | NA | non-coding | upstream | 23424 | 30444622 ~ 30444904 (+) |
| G2173761 | LOC106563448 | non-coding | upstream | 113238 | 30336852 ~ 30355090 (+) |
| G2173744 | NA | non-coding | upstream | 158593 | 30299613 ~ 30309735 (+) |
| G2173747 | NA | non-coding | upstream | 161321 | 30304213 ~ 30307007 (+) |
| G2173869 | NA | non-coding | downstream | 43181 | 30512090 ~ 30512374 (+) |
| G2173871 | NA | non-coding | downstream | 45182 | 30514091 ~ 30514328 (+) |
| G2173872 | NA | non-coding | downstream | 46052 | 30514961 ~ 30515185 (+) |
| G2173878 | NA | non-coding | downstream | 54503 | 30523412 ~ 30523629 (+) |
| G2173882 | LOC106563445 | non-coding | downstream | 58232 | 30527141 ~ 30529621 (+) |
| G2173841 | LOC106563447 | other | upstream | 204 | 30463942 ~ 30468124 (+) |
| G2173754 | LOC106563449 | other | upstream | 144713 | 30319648 ~ 30323615 (+) |
| G2173675 | NA | other | upstream | 331008 | 30136723 ~ 30137320 (+) |
| LOC110509998 | LOC106563463 | other | upstream | 514518 | 29952492 ~ 29956193 (+) |
| G2174785 | NA | other | downstream | 848928 | 31317837 ~ 31318377 (+) |
| G2175233 | psmb6 | other | downstream | 1141635 | 31610544 ~ 31611469 (+) |
| LOC110509422 | LOC106563560 | other | downstream | 1432072 | 31820484 ~ 31908546 (+) |
| G2175413 | NA | other | downstream | 1568138 | 32037047 ~ 32037736 (+) |
