LOC110510004 (LOC106563454)


Basic Information

Item Value
gene id LOC110510004
gene name LOC106563454
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 30139343 ~ 30147325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591263.2
TATATCTCTACAATGGCATAGATACAAAGATGAGCCCTCTATCTATGTCCATTCCCCCATAACTCCTTGCGCGCGTCTATGTTCACAGATGACCAAAATGGCGGATTCGTCGGTCGATGTTATCGAGGGCTGTCGGCTCCCTGTTCTCCGAAAAAATCAGGAAAACGAAGACGAGTGGCCCTTGGCTGAAATTCTCAGTGTGAAAGAGATCCCTGGGAGAAAACTCTACTATGTCCACTATATTGACTTCAACAAGCGTCTGGATGAGTGGGTTACTCCGGAAAGGCTTGACATGAAGAAGCTCCAGTTCCCTAAGAAGGAGGCTAAAACGCCTACTAAGAACGGGCTTCCGGGTTCACGTCCCAGCTccccagagagagaggtggtaagagCGGCCGGAACGGGCCCCCAACATCCCCCCAACCGGCCCCCCCAGCCGCAAGCCCAGCAGAAGTGTCTACCCACCAAGACTTCTATACCAGACTTTCAAGTGCTGCAACAACAAGTTCAGAGGAAGAGTCTTGATCTCAACCTTCAGACTGCCACAGCTCCTTCCAGAGGCAAAACCCTGCCCACACCGAAGAGGAAAGCAGAGTCTGTGTCCCTGGCAACACAAGTGTCCCCGGCAACCCCCGTGCCATCCTTGCCAGGTTTGGCTGAAGCCTCCCAGGTGTCAGTTTACCCTGCTGTGAGGGACACCAACACTTTCAACCTCAAATCCAACGCCCACGATGACCACGAGCAGCTTACCTCACTCACCACGAATGGTACTGCCCGTCGCCCCATGCCCAATCAACCAGGCAGGAAGAGGAAGCAGCCCCCCAACTGTGGGGGAACCGATGAGATAATTAAGGTTTTCCAGTATAACAACAGCCCTCGATGTGCCAATGTCTATCTGCCGCCAGGAGAGGACTCGCAGGACAGCTCCGATGGCATCCCCTCTGCCCCTCGCATGACCGGCAGTCTGGTGTCGGACCGTAGCCATGACGACATTGTCACGCGTATGAAGAACATTGACTGCATTGAACTGGGCCGCCACAGGCTGAAGCCCTGGTACTTCTCCCCCTACCCACAGGAACTGACCACATTGCCTATTCTCTACCTCTGCGAGTTCTGCCTCAAGTACCTCAAGAGCCTTAAGTGTCTGCAGAGGCATCTGACCAAGTGTAATCTTCGGCATCCCCCTGGCAATGAGATCTACCGCAAGGGCACCATCTCCTTTTTTGAAATAGACGGCAGAAAAAACAAAACATACTCTCAGAACCTGTGTTTACTGGCCAAGTGTTTCCTGGACCACAAGACGCTGTACTATGACACAGACCCCTTCCTCTTCTACGTCATGACAGAGTACGACTCCAAGGGCTTCCACATAGTGGGCTACTTCTCCAAGGAGAAAGAGTCGACGGAAGATTACAACGTGGCTTGTATTCTCACCTTACCTCCCTACCAGAGGAGAGGCTACGGCAAATTGCTCATTGAGTTCAGTTATGAGCTGTCTAAGGTAGAGGGGAAGACGGGCACACCAGagaagcctctgtctgacctgggGCTGCTCTCCTACCGCTCCTACTGGTCCCAGACCATCCTGGAGATCCTCATGGACCTCAAGCCTGACAACGGGGAGAGGCCTCAGATCACAATCAATGAGATCAGTGAAATCACCAGTGTGAAGAAAGAGGATGTCATATCTACACTTCAGTACCTAAACCTAATAAACTACTATAAGGGCCAGTATATTCTGACTCTTTCAGAGGACATAGTGGAGGGGCATGAGAGAGCAATGCAGAAGCGTCATCTGCCCATTGACCCCAAATGCCTTCACTTCACCCCCAAGGACTGGAGCAAGAGGGGCAAGTGGTAGaaccctgtctgtttctcctggcCCCACTCTCCCTCTTACCACAGACTTTCCTGAAGCAATCAGGATGGAGTGCACCACAGGTCTCCTCAGAGGGAGCTTCAATAGATGTATTTTTTCTTCCCCCTAATCGTCATCGGACCCTTTTTGTTGAAGATTTAAAAATGAACCAGAGCTGTTTATTACCCATGTTTCATTTCACTGTTCTGTCTTTGACACAAGTAGATACATTTTCTTAGTCTCAAAGTAGGAATGGTCATAATTTCAGATTGAGGACTCCTACCCTCGGTTTCTTCAACAGAGTGTGCCAGGAAGGTGAAGGCAGTCTTGGACAGAATATGTGCTCATGTTAGTGAAAATCACTCTGTTATTGTTTTGGATGTAATCCTGGATTTTGACTACATGTCCAGTTTCATTGATCCAACACACAATGAGAACTACAGATCTAACTGTATATACACTATCCTGTTTTATAAATGATTTTTAAAGTGGTGAAGCATTTCTGTATGTCAAATGTAATGTGCGGGGATGCTCAGTACAGAAAATAAGCCATGTCGAACTGTTACAAGAATGTAAATGTGGATACATGTACAGTTctgtcctttaaaaaaaaacttgaatgtaAATGAACATGTTTGGCACTGTGTGTGTCATTTAATTTAATTACTATTTActgtacatttgtgtgtattaggaaTTTGTAATAAGTGAAATCATACTTTTTTTGTGTTGTCGCTACTATTTGGTCATTTCCCTTCATATTTAAGTGCAAATTCAACGTTGATTTGTTTTATCTTTTGTATTATCTGAACAGTGTAGGGGTTTGTAAGTGGTTTAGGGTGTGGGAATGGgtgatttaaataaaaaaaagttcaCATTTTTGGCCACACTGAAAGGCTATAAATCTAACAAACATGAGCTTTATATAAAAGCCTAAAGAGATGGATTTACACATATCTAATAAACTAGGGCACTTTTA

Function

NR:

description
histone acetyltransferase KAT5-like

GO: NA

KEGG:

id description
K11304 TIP60, KAT5, ESA1; histone acetyltransferase HTATIP

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591263.2 True 2837 mRNA 0.47 15 30139343 30147325

Neighbor

gene id symbol gene type direction distance location
LOC110510002 LOC106563456 coding upstream 3403 30129518 ~ 30135940 (+)
LOC110510005 LOC106563457 coding upstream 11816 30120517 ~ 30127527 (+)
LOC110510000 LOC106563458 coding upstream 31842 30050188 ~ 30107503 (+)
LOC110509999 LOC106563461 coding upstream 131882 29978474 ~ 30007461 (+)
LOC110509374 LOC106563556 coding upstream 161752 29973566 ~ 29977591 (+)
zmp:0000001168 LOC106563451 coding downstream 28179 30175504 ~ 30222113 (+)
LOC110510009 LOC106563450 coding downstream 117665 30264990 ~ 30291203 (+)
LOC110510020 LOC106563438 coding downstream 505367 30652692 ~ 30669474 (+)
LOC110509412 LOC106563437 coding downstream 544636 30691961 ~ 30780818 (+)
il13ra2b il13ra2b coding downstream 639419 30786744 ~ 30804819 (+)
G2173674 NA non-coding upstream 10562 30128488 ~ 30128781 (+)
G2173685 NA non-coding upstream 18988 30120018 ~ 30120355 (+)
G2173677 NA non-coding upstream 20788 30118046 ~ 30118555 (+)
G2173683 NA non-coding upstream 23359 30115731 ~ 30115984 (+)
G2173664 NA non-coding upstream 47305 30091833 ~ 30092038 (+)
G2173737 NA non-coding downstream 131293 30278618 ~ 30279652 (+)
G2173738 NA non-coding downstream 134681 30282006 ~ 30284686 (+)
G2173744 NA non-coding downstream 152288 30299613 ~ 30309735 (+)
G2173747 NA non-coding downstream 156888 30304213 ~ 30307007 (+)
G2173675 NA other upstream 2023 30136723 ~ 30137320 (+)
LOC110509998 LOC106563463 other upstream 185533 29952492 ~ 29956193 (+)
G2173551 vps51 other upstream 243064 29894094 ~ 29896279 (+)
LOC110509988 tmem261 other upstream 268026 29869091 ~ 29874237 (+)
LOC110509970 LOC106563483 other upstream 477109 29652518 ~ 29662236 (+)
G2173754 LOC106563449 other downstream 172323 30319648 ~ 30323615 (+)
G2173761 LOC106563448 other downstream 189527 30336852 ~ 30355090 (+)
G2173841 LOC106563447 other downstream 316617 30463942 ~ 30468124 (+)
LOC110510022 LOC106563433 other downstream 675289 30817845 ~ 30824144 (+)
G2174785 NA other downstream 1170512 31317837 ~ 31318377 (+)

Expression


Co-expression Network