G2173664


Basic Information

Item Value
gene id G2173664
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 30091833 ~ 30092038 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2484299
caacagtagtaacagctgcagcagcaacagtagtaacagcagcagcagcgacagtagtaacagcagcaacaacattagtgacagcagcagcagcaacagtaataacagcagcagcaacagtagtgacagcagcagcaacagtagtgcaacagcagcagcaacagtagttacagcagcaacagtagtaacagcagcatccccaacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2484299 True 206 lncRNA 0.49 1 30091833 30092038

Neighbor

gene id symbol gene type direction distance location
LOC110509999 LOC106563461 coding upstream 84372 29978474 ~ 30007461 (+)
LOC110509374 LOC106563556 coding upstream 114242 29973566 ~ 29977591 (+)
LOC110509998 LOC106563463 coding upstream 135640 29952492 ~ 29956193 (+)
LOC110509996 LOC106563468 coding upstream 150848 29940307 ~ 29940985 (+)
LOC110509993 slc25a45 coding upstream 166156 29914857 ~ 29925677 (+)
LOC110510005 LOC106563457 coding downstream 28479 30120517 ~ 30127527 (+)
LOC110510002 LOC106563456 coding downstream 37480 30129518 ~ 30135940 (+)
LOC110510004 LOC106563454 coding downstream 47305 30139343 ~ 30147325 (+)
zmp:0000001168 LOC106563451 coding downstream 83466 30175504 ~ 30222113 (+)
LOC110510009 LOC106563450 coding downstream 172952 30264990 ~ 30291203 (+)
G2173622 NA non-coding upstream 37482 30013013 ~ 30054351 (+)
G2173641 NA non-coding upstream 43432 30047972 ~ 30048401 (+)
G2173621 NA non-coding upstream 80357 30011250 ~ 30011476 (+)
G2173611 NA non-coding upstream 91272 29999760 ~ 30000561 (+)
G2173683 NA non-coding downstream 23693 30115731 ~ 30115984 (+)
G2173677 NA non-coding downstream 26008 30118046 ~ 30118555 (+)
G2173685 NA non-coding downstream 27980 30120018 ~ 30120355 (+)
G2173674 NA non-coding downstream 36450 30128488 ~ 30128781 (+)
G2173551 vps51 other upstream 195554 29894094 ~ 29896279 (+)
LOC110509988 tmem261 other upstream 220516 29869091 ~ 29874237 (+)
LOC110509970 LOC106563483 other upstream 429599 29652518 ~ 29662236 (+)
G2173114 NA other upstream 504361 29585594 ~ 29587472 (+)
G2173675 NA other downstream 44685 30136723 ~ 30137320 (+)
G2173754 LOC106563449 other downstream 227610 30319648 ~ 30323615 (+)
G2173761 LOC106563448 other downstream 244814 30336852 ~ 30355090 (+)
G2173841 LOC106563447 other downstream 371904 30463942 ~ 30468124 (+)
LOC110510022 LOC106563433 other downstream 730576 30817845 ~ 30824144 (+)

Expression


Co-expression Network