G2173674


Basic Information

Item Value
gene id G2173674
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 30128488 ~ 30128781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2484309
aggaaatcaatcaatttaaacaagttcattaggccctaatctatggatttcatgactgggcagggtataggcccagccaatcagaattagtttttccccacaaaaaaaCTTTTATAGACAGAATTAGACCTCATtttcagatgatcctgcaggtgaagagggcggatgtggaggtcctgggctggcatggttacatgtggtctgaggTCATGAGAccgtttggacgtactgccaaatactctaaaatgacattggaggctgtttatgatagagaaattaaaTTCTAATTCTTCA

Function

NR:

description
Transposable element Tcb2 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2484309 True 294 lncRNA 0.41 1 30128488 30128781

Neighbor

gene id symbol gene type direction distance location
LOC110510005 LOC106563457 coding upstream 961 30120517 ~ 30127527 (+)
LOC110510000 LOC106563458 coding upstream 20987 30050188 ~ 30107503 (+)
LOC110509999 LOC106563461 coding upstream 121027 29978474 ~ 30007461 (+)
LOC110509374 LOC106563556 coding upstream 150897 29973566 ~ 29977591 (+)
LOC110509998 LOC106563463 coding upstream 172295 29952492 ~ 29956193 (+)
LOC110510002 LOC106563456 coding downstream 737 30129518 ~ 30135940 (+)
LOC110510004 LOC106563454 coding downstream 10562 30139343 ~ 30147325 (+)
zmp:0000001168 LOC106563451 coding downstream 46723 30175504 ~ 30222113 (+)
LOC110510009 LOC106563450 coding downstream 136209 30264990 ~ 30291203 (+)
LOC110510020 LOC106563438 coding downstream 523911 30652692 ~ 30669474 (+)
G2173685 NA non-coding upstream 8133 30120018 ~ 30120355 (+)
G2173677 NA non-coding upstream 9933 30118046 ~ 30118555 (+)
G2173683 NA non-coding upstream 12504 30115731 ~ 30115984 (+)
G2173664 NA non-coding upstream 36450 30091833 ~ 30092038 (+)
G2173737 NA non-coding downstream 149837 30278618 ~ 30279652 (+)
G2173738 NA non-coding downstream 153225 30282006 ~ 30284686 (+)
G2173744 NA non-coding downstream 170832 30299613 ~ 30309735 (+)
G2173747 NA non-coding downstream 175432 30304213 ~ 30307007 (+)
G2173551 vps51 other upstream 232209 29894094 ~ 29896279 (+)
LOC110509988 tmem261 other upstream 257171 29869091 ~ 29874237 (+)
LOC110509970 LOC106563483 other upstream 466254 29652518 ~ 29662236 (+)
G2173114 NA other upstream 541016 29585594 ~ 29587472 (+)
G2173675 NA other downstream 7942 30136723 ~ 30137320 (+)
G2173754 LOC106563449 other downstream 190867 30319648 ~ 30323615 (+)
G2173761 LOC106563448 other downstream 208071 30336852 ~ 30355090 (+)
G2173841 LOC106563447 other downstream 335161 30463942 ~ 30468124 (+)
LOC110510022 LOC106563433 other downstream 693833 30817845 ~ 30824144 (+)

Expression


Co-expression Network