Gene
RNA
| Item | Value |
|---|---|
| gene id | G2173737 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 30278618 ~ 30279652 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2484384 | False | 271 | lncRNA | 0.37 | 2 | 30278618 | 30279075 |
| TU2484385 | True | 611 | lncRNA | 0.38 | 2 | 30278618 | 30279652 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zmp:0000001168 | LOC106563451 | coding | upstream | 56506 | 30175504 ~ 30222113 (+) |
| LOC110510004 | LOC106563454 | coding | upstream | 131293 | 30139343 ~ 30147325 (+) |
| LOC110510002 | LOC106563456 | coding | upstream | 142678 | 30129518 ~ 30135940 (+) |
| LOC110510005 | LOC106563457 | coding | upstream | 151091 | 30120517 ~ 30127527 (+) |
| LOC110510000 | LOC106563458 | coding | upstream | 171117 | 30050188 ~ 30107503 (+) |
| LOC110510020 | LOC106563438 | coding | downstream | 373040 | 30652692 ~ 30669474 (+) |
| LOC110509412 | LOC106563437 | coding | downstream | 412309 | 30691961 ~ 30780818 (+) |
| il13ra2b | il13ra2b | coding | downstream | 507092 | 30786744 ~ 30804819 (+) |
| LOC110510022 | LOC106563433 | coding | downstream | 538193 | 30817845 ~ 30824144 (+) |
| LOC110510024 | LOC106563431 | coding | downstream | 641836 | 30921488 ~ 31017638 (+) |
| G2173674 | NA | non-coding | upstream | 149837 | 30128488 ~ 30128781 (+) |
| G2173685 | NA | non-coding | upstream | 158263 | 30120018 ~ 30120355 (+) |
| G2173677 | NA | non-coding | upstream | 160063 | 30118046 ~ 30118555 (+) |
| G2173683 | NA | non-coding | upstream | 162634 | 30115731 ~ 30115984 (+) |
| G2173738 | NA | non-coding | downstream | 2354 | 30282006 ~ 30284686 (+) |
| G2173744 | NA | non-coding | downstream | 19961 | 30299613 ~ 30309735 (+) |
| G2173747 | NA | non-coding | downstream | 24561 | 30304213 ~ 30307007 (+) |
| G2173761 | LOC106563448 | non-coding | downstream | 57200 | 30336852 ~ 30355090 (+) |
| G2173832 | NA | non-coding | downstream | 164970 | 30444622 ~ 30444904 (+) |
| G2173675 | NA | other | upstream | 141298 | 30136723 ~ 30137320 (+) |
| LOC110509998 | LOC106563463 | other | upstream | 324808 | 29952492 ~ 29956193 (+) |
| G2173551 | vps51 | other | upstream | 382339 | 29894094 ~ 29896279 (+) |
| LOC110509988 | tmem261 | other | upstream | 407301 | 29869091 ~ 29874237 (+) |
| LOC110509970 | LOC106563483 | other | upstream | 616384 | 29652518 ~ 29662236 (+) |
| G2173754 | LOC106563449 | other | downstream | 39996 | 30319648 ~ 30323615 (+) |
| G2173841 | LOC106563447 | other | downstream | 184290 | 30463942 ~ 30468124 (+) |
| G2174785 | NA | other | downstream | 1038185 | 31317837 ~ 31318377 (+) |
