Gene
RNA
| Item | Value |
|---|---|
| gene id | G2173621 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 30011250 ~ 30011476 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2484254 | True | 227 | lncRNA | 0.44 | 1 | 30011250 | 30011476 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509999 | LOC106563461 | coding | upstream | 3789 | 29978474 ~ 30007461 (+) |
| LOC110509374 | LOC106563556 | coding | upstream | 33659 | 29973566 ~ 29977591 (+) |
| LOC110509998 | LOC106563463 | coding | upstream | 55057 | 29952492 ~ 29956193 (+) |
| LOC110509996 | LOC106563468 | coding | upstream | 70265 | 29940307 ~ 29940985 (+) |
| LOC110509993 | slc25a45 | coding | upstream | 85573 | 29914857 ~ 29925677 (+) |
| LOC110510000 | LOC106563458 | coding | downstream | 38712 | 30050188 ~ 30107503 (+) |
| LOC110510005 | LOC106563457 | coding | downstream | 109041 | 30120517 ~ 30127527 (+) |
| LOC110510002 | LOC106563456 | coding | downstream | 118042 | 30129518 ~ 30135940 (+) |
| LOC110510004 | LOC106563454 | coding | downstream | 127867 | 30139343 ~ 30147325 (+) |
| zmp:0000001168 | LOC106563451 | coding | downstream | 164028 | 30175504 ~ 30222113 (+) |
| G2173611 | NA | non-coding | upstream | 10689 | 29999760 ~ 30000561 (+) |
| G2173614 | NA | non-coding | upstream | 16097 | 29983324 ~ 29995153 (+) |
| G2173603 | NA | non-coding | upstream | 40678 | 29969184 ~ 29970572 (+) |
| G2173553 | NA | non-coding | upstream | 118826 | 29891987 ~ 29892424 (+) |
| G2173622 | NA | non-coding | downstream | 1537 | 30013013 ~ 30054351 (+) |
| G2173641 | NA | non-coding | downstream | 36496 | 30047972 ~ 30048401 (+) |
| G2173664 | NA | non-coding | downstream | 80357 | 30091833 ~ 30092038 (+) |
| G2173683 | NA | non-coding | downstream | 104255 | 30115731 ~ 30115984 (+) |
| G2173551 | vps51 | other | upstream | 114971 | 29894094 ~ 29896279 (+) |
| LOC110509988 | tmem261 | other | upstream | 139933 | 29869091 ~ 29874237 (+) |
| LOC110509970 | LOC106563483 | other | upstream | 349016 | 29652518 ~ 29662236 (+) |
| G2173114 | NA | other | upstream | 423778 | 29585594 ~ 29587472 (+) |
| G2173675 | NA | other | downstream | 125247 | 30136723 ~ 30137320 (+) |
| G2173754 | LOC106563449 | other | downstream | 308172 | 30319648 ~ 30323615 (+) |
| G2173761 | LOC106563448 | other | downstream | 325376 | 30336852 ~ 30355090 (+) |
| G2173841 | LOC106563447 | other | downstream | 452466 | 30463942 ~ 30468124 (+) |
| LOC110510022 | LOC106563433 | other | downstream | 811138 | 30817845 ~ 30824144 (+) |
