XLOC_004081 (qrich1)


Basic Information

Item Value
gene id XLOC_004081
gene name qrich1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 17997403 ~ 18107447 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007782
GCTTGCGGCAGCAGTGGAGCCGGAAGGGGGAGCTGCGATTCCGTCCCCGCCTTCACGCTACAGGACAGCCCGGGGTCTAGCGCTGTCACAGCAGGCCTACTTCCGTCAGCTCTATcgcaaacattattattaaaaaaaacacaattacggCCATCCAAGCCTTCCAAGCAGCGCATTTGTGTGTTTTCCACTACGGCTCCTGTACAGGGTGGACTGACCTGTCATGAATGAGCCCATTGAAGGCGGTGCGATCTCGTTCGACGAGTATGTGCGGCAGAAGGCGCGCACTATACCTCAGCACCGCATGAAAGAGTTCCTGGAGTCGCTGGCCTCCAAAGGCCCAGAGGTGTTGCAGGAGTTCAGCCAGCAGACCAGCGGCACCACAACCACAATGGTGTACCAACAGGGTGCCAACTGCATCTACACGGACAGCACAGAGGTGGCGGGCTCATTGCTGGAGCTGGCATGTCCGGTTCAGGTGACATCGACACAGATCTCACCCCAGCTGGCTGCAGCTGTGCATCAGGCATCTGAACAGCAGATCCAAGTACAGGTGCAGATTCAAGGTGAGCAGGGTCAGACAGTGGGCCAGGTACTTCAGGTGGCTTCTCCTACCCAACAGCAGCTACAAGGAGTTACTACAACACAGCTGGTACAACAGGGAGAGCTCACAgaggaacaacaacaacagATCCAGGCTCAGCTGGTGGCAGCAGTTGCCGGAGGTCAGCAGATTCAGATCCAAACAGTGGAGGCTCTGTCCCCTCAGCAGCAGGGTTCCCCCAGGGAAGTGGACCGACGAACTGGAGCCTCGCCTGCCGTCCTCCAGCCTGCAAAGAAACGCAAGGTGGACGTCCCTACAGTTGTGTCCTACTCGCTCCCTCAAGGGCAGCAGCTGGCTACCGTATTGGCCATACCGCAGGGCCAACAGCAGGGCTACTTGTCACTTCGACCAGACCTGCTGACCGTTGACAGCACTCACCTCTACAGTGCCACTGGTACCATCACAGGCCCGGCCGGCGAGACCTGGACCATACCCGTGTACTCTGCCCCACAGCAGCAAGGTGTGGCCCACATCGCCATCCCACAAGAGGCCTACAGCACCGTGCAGGTCCAGGCCTCGCCAACCGATAAAGACAAAGACAAGATGATTATCGGTGCATCTCAGGCTGCAGGGGCAGTGGCAGTTCCAGTGTCCAGCTCAGGAGTGACCACTCAGGAGGAAGTTGTACATTCACTGTTTCCTGCGCAGTTTATGAATGGAAACATTCACATCCCTGTCGCCGTGCAGACTGTAGGGGGCGCTTATTCTGGAACAACGCAGGCCCTGCATATATGGGATccacaacaacagcagcagcacgTGCAGGATGGAGAAGTACAGGAACAACAGCTCCATCTGCAGGCGCAGACCGAGGCAGAGCCACAGGTAGAGCCTCCTCCTGAGCTGGTCCTCCCAAACACGCTGAAGCCTGAGGACGGGCTAGAGGTCTGGAGGCTTTGGGTTCAGCGCAAAAATGCTGAGCTggacaaaaatgaacaaaataagcTGGCACCTATTGGACGTCGACAGCCGCTGCGCTTCCAGGACGATCTTGTGTCGAGTTCAGTGGGAGAGTTGAACCTGGCTCTGTCCCTGATGACTCAAGAGGCCCGTGGGCTGGAGGGAGAGCTGTTCGAACCCGATTCATTATactatgtatttttatgtatacaGAAATACATGTTTGAGAACGGCAGAGTAGACGACATCTTCTCTGATCAGTACTATAGCCGCTTCTGTCAGTGTTTACACAAAATTTTGGAGGAGTGGAGGCCCAGTATTCATCCTCTTGGCTATATCATCCCAAGTCACGTGACAGAGGAGATGCTGTGGGAATGTAAGCAGTTGGGAGCTCACTCACCAGCCACTCTCCTCACTACACTGATGTATTTCAACACCAAGTACTTTCACTTGACCACAGTGGAGCAGCATATGAAAGTGGCCTTCTCCAAAGTGCTCAGACATACAAAGAAGAATCCCACCAACCCTAAAGACAAGAGCACCAGCATCCGCTACCTGAAAGGAGTTGGACCACACCATGTCGGACAGAAAGTGACTGATGACATGTACGCAGAACAGGCTGAAGACCCCGAGAACCCGCTGCGCTGTCCCATCAAGCTCTATGACTTTTACCTCTTTAAATGCCCTCAGACTGCTAAGGGTCGCAATGACACGTATTACCTGACGCCGGAGCCTGTAGTGGCACCCAACAGCCCCATCTGGTACTCCACTCAGCCAATCACGAGCGAGCAACTGGAGCACATGCTAACACGCATCATGATGGTGCGGGAAATCCAAGAGATTATCTCCATCACGCAGACCAGCGTTCAATGAGAGACGACGCTTAAGGGGAAAAGGAAAGAagtgaaagatggatggatggatccatGGATGGATCTCCAGCGTCATCCAAACAGACTGAATTACATTTCCTCTGCGGCATCTCTTTATATTCATCCACCACTAAAAGGAGAATCAAGTGGAGTTTTGGATGAGCTGGATTACGTGCATaaaagccttttgttttgttttgtttttagagacAGGAACTTCTTTCTGTTTGTTCGCCTAATGAAACGTATTCAGATCCCAGATCCCTTGATGTGTGCATTTCTCTCTTTCTGCCATGTATGTTACGCTCCATCCCTTCTCCCACTGTCCGGTTTCATTTTCTTTCAATAAGTGCTGAACTTTAAGGATCTGGTGGTTTCGAAGAATGATTTAAGGCATTTTTGTTTTGGTAGTGGACTGGAACACATCAGGTGTTTAAAAACATGGCCTCATCCATCTGTAACCGTTAACACATCCCTCGCTCGCCTCCGGGAGCTTTTGCAGTAGCAGAGATTGCGTACCTGAGGAGTGTATTATACATCAAGACTTTTTGgttctgtttttatttgatttttttttatatacatatatatatatatacactcacacatgcaTCTATGGTAATCTGATATGTATTGATATTATAGTGGTGCTGGAGAACTGAAGCCTGTGTTTTCAAACATGCCTTTTTGTACAGTGAATCACCTGTGGTGTGTTGTCTTTGAGTCTTTCTGCAGTCtggcacacaaacacaacacacaggCAGAATAAATTTCTTTGTAAGTA
>TCONS_00007783
attattattaaaaaaacacaattacgGCCATCCAAGCCTTCCAAGCAGCGCATTTGTGTGTTTTCCACTACGGCTCCTGTACAGGGTGGACTGACCTGTCATGAATGAGCCCATTGAAGGCGGTGCGATCTCGTTCGACGAGTATGTGCGGCAGAAGGCGCGCACTATACCTCAGCACCGCATGAAAGAGTTCCTGGAGTCGCTGGCCTCCAAAGGCCCAGAGGTGTTGCAGGAGTTCAGCCAGCAGACCAGCGGCACCACAACCACAATGGTGTACCAACAGGGTGCCAACTGCATCTACACGGACAGCACAGAGGTGGCGGGCTCATTGCTGGAGCTGGCATGTCCGGTTCAGGTGACGTCGACACAGATCTCACCCCAGCTGGCTGCAGCTGTGCATCAGGCATCTGAACAGCAGATCCAAGTACAGGTGCAGATTCAAGGTGAGCAGGGTCAGACAGTGGGCCAGGTACTTCAGGTGGCTTCTCCTACCCAACAGCAGCTACAAGGAGTTACTACAACACAGCTGGTACAACAGGGAGAGCTCACAgaggaacaacaacaacagATCCAGGCTCAGCTGGTGGCAGCAGTTGCCGGAGGTCAGCAGATTCAGATCCAAACAGTGGAGGCTCTGTCCCCTCAGCAGCAGGGTTCCCCCAGGGAAGTGGACCGACGAACTGGAGCCTCGCCTGCCGTCCTCCAGCCTGCAAAGAAACGCAAGGTGGACGTCCCTACAGTTGTGTCCTACTCGCTCCCTCAAGGGCAGCAGCTGGCTACCGTATTGGCAATACCGCAGGGCCAACAGCAGGGCTACTTGTCACTTCGACCAGACCTGCTGACCGTTGACAGCACTCACCTCTACAGTGCCACTGGTACCATCACAGGCCCGGCCGGCGAGACCTGGACCATACCCGTGTACTCTGCCCCGCAGCAGCAAGGTGTGGCCCACATCGCCATCCCACAAGAGGCCTACAGCACCGTGCAGGTCCAGGCCTCGCCAACCGATAAAGACAAAGACAAGATGATTATCGGTGCATCTCAGGCTGCAGGGGCAGTGGCAGTTCCAGTGTCCAGCTCAGGAGTGACCACTCAAGAGGAAGTTGTACATTCACTGTTTCCTGCGCAGTTTATGAATGGAAACATTCACATCCCTGTCGCCGTGCAGACTGTAGGGGGCGCTTATTCTGGAACAACACAGGCCCTGCATATATGGGATccacaacaacagcagcagcacgTGCAGGATGGAGAAGTACAGGAACAACAGCTCCATCTGCAGGCGCAGACCGAGGCAGAGCCACAGGTAGAGCCTCCTCCTGAGCTGGTCCTCCCAAACACGCTGAAGCCTGAGGACGGGCTAGAGGTCTGGAGGCTTTGGGTTCAGCGCAAAAATGCTGAGCTggacaaaaatgaacaaaataagcTGGCACCTATTGGACGTCGACAGCCGCTGCGCTTCCAGGACGATCTTGTGTCGAGTTCAGTGGGAGAGTTGAACCTGGCTCTGTCCCTGATGACTCAAGAGGCCCGTGGGCTGGAGGGAGAGCTGTTCGAACCCGATTCATTATactatgtatttttatgtatacaGAAATACATGTTTGAGAACGGCAGAGTAGACGACATCTTCTCTGATCAGTACTATAGCCGCTTCTGTCAGTGTTTACACAAAATTTTGGAGGAGTGGAGGCCCAGTATTCATCCTCTTGGCTATATCATCCCAAGTCACGTGACAGAGGAGATGCTGTGGGAATGTAAGCAGTTGGGAGCTCACTCACCAGCCACTCTCCTCACTACACTGATGTATTTCAACACCAAGTACTTTCACTTGACCACAGTGGAGCAGCATATGAAAGTGGCCTTCTCCAAAGTGCTCAGACATACAAAGAAGAATCCCACCAACCCTAAAGACAAGAGCACCAGCATCCGCTACCTGAAAGGAGTTGGACCACACCATGTCGGACAGAAAGTGACTGATGACATGTACGCAGAACAGGCTGAAGACCCCGAGAACCCGCTGCGCTGTCCCATCAAGCTCTATGACTTTTACCTCTTTAAATGCCCTCAGACTGCTAAGGGTCGCAATGACACGTATTACCTGACGCCGGAGCCTGTAGTGGCACCCAACAGCCCCATCTGGTACTCCACTCAGCCAATCACGAGCGAGCAACTGGAGCACATGCTAACACGCATCATGATGGTGCGGGAAATCCAAGAGATTATCTCCATCACGCAGACCAGCGTTCAATGAGAGACGACGCTTAAGGGGAAAAGGAAAGAAGTAATAGATGGATGGAGATCTCCAGCGTCATCCAAACAGACTGAATTACATTTCCTCTGCGGCATCTCTTTATATTCATCCACCACTAAAAGGAGAATCAAGTGGAGTTTTGGATGAGCTGGATTACGTGCATaaaagccttttgttttgttttgtttttagagacAGGAACTTCTTTCTGTTTGTTCGCCTAATGAAACGTATTCAGATCCCAGATCCCTTGATGTGTGCATTTCTCTCTTTCTGCCATGTATGTTACGCTCCATCCCTTCTCCCACTGTCCGGTTTCATTTTCTTTCAATAAGTGCTGAACTTTAAGGATCTGGTGGTTTCGAAGAATGATTTAAGGCATTTTTGTTTTGGTAGTGGACTGGAACACATCAGGTGTTTAAAAACATGGCCTCATCCATCTGTAACCGTTAACACATCCCTCGCTCGCCTCCGGGAGCTTTTGCAGTAGCAGAGATTGCGTACCTGAGGAGTGTATTATACATCAAGACTTTTTGgttctgtttttatttgatttttttttatatacatatatatatatatacactcacacatgcaTCTATGGTAATCTGATATGTATTGATATTATAGTGGTGCTGGAGAACTGAAGCCTGTGTTTTCAAACATGCCTTTTTGTACAGTG
>TCONS_00007784
GtgtgatgtatgtatgtatgtatgtatgtatgtatgcatacacacacacacacacacacacacacagacagacacacacacacacacacacacacacacacacactggagttCAAATGTCATCTTTTCACAGGTACTTTCACTTGACCACAGTGGAGCAGCATATGAAAGTGGCCTTCTCCAAAGTGCTCAGACATACAAAGAAGAATCCCACCAACCCTAAAGACAAGAGCACCAGCATCCGCTACCTGAAAGGAGTTGGACCACACCATGTCGGACAGAAAGTGACTGATGACATGTACGCAGAACAGGCTGAAGACCCCGAGAACCCGCTGCGCTGTCCCATCAAGCTCTATGACTTTTACCTCTTTAAATGCCCTCAGACTGCTAAGGGTCGCAATGACACGTATTACCTGACGCCGGAGCCTGTAGTGGCACCCAACAGCCCCATCTGGTACTCCACTCAGCCAATCACGAGCGAGCAACTGGAGCACATGCTAACACGCATCATGATGGTGCGGGAAATCCAAGAGATTATCTCCATCACGCAGACCAGCGTTCAATGAGAGACGACGCTTAAGGGGAAAAGGAAAGAagtgaaagatggatggatggatccatGGATGGATCTCCAGCGTCATCCAAACAGACTGAATTACATTTCCTCTGCGGCATCTCTTTATATTCATCCACCACTAA
>TCONS_00007785
ATGAATGAGCCCATTGAAGGCGGTGCGATCTCGTTCGACGAGTATGTGCGGCAGAAGGCGCGCACTATACCTCAGCACCGCATGAAAGAGTTCCTGGAGTCGCTGGCCTCCAAAGGCCCAGAGGTGTTGCAGGAGTTCAGCCAGCAGACCAGCGGCACCACAACCACAATGGTGTACCAACAGGGTGCCAACTGCATCTACACGGACAGCACAGAGGTGGCGGGCTCATTGCTGGAGCTGGCATGTCCGGTTCAGGTGACATCGACACAGATCTCACCCCAGCTGGCTGCAGCTGTGCATCAGGCATCTGAACAGCAGATCCAAGTACAGGTGCAGATTCAAGGTGAGCAGGGTCAGACAGTGGGCCAGGTACTTCAGGTGGCTTCTCCTACCCAACAGCAGCTACAAGGAGTTACTACAACACAGCTGGTACAACAGGGAGAGCTCACAgaggaacaacaacaacagATCCAGGCTCAGCTGGTGGCAGCAGTTGCCGGAGGTCAGCAGATTCAGATCCAAACAGTGGAGGCTCTGTCCCCTCAGCAGCAGGGTTCCCCCAGGGAAGTGGACCGACGAACTGGAGCCTCGCCTGCCGTCCTCCAGCCTGCAAAGAAACGCAAGGTGGACGTCCCTACAGTTGTGTCCTACTCGCTCCCTCAAGGGCAGCAGCTGGCTACCGTATTGGCCATACCGCAGGGCCAACAGCAGGGCTACTTGTCACTTCGACCAGACCTGCTGACCGTTGACAGCACTCACCTCTACAGTGCCACTGGTACCATCACAGGCCCGGCCGGCGAGACCTGGACCATACCCGTGTACTCTGCCCCACAGCAGCAAGGTGTGGCCCACATCGCCATCCCACAAGAGGCCTACAGCACCGTGCAGGTCCAGGCCTCGCCAACCGATAAAGACAAAGACAAGATGATTATCGGTGCATCTCAGGCTGCAGGGGCAGTGGCAGTTCCAGTGTCCAGCTCAGGAGTGACCACTCAGGAGGAAGTTGTACATTCACTGTTTCCTGCGCAGTTTATGAATGGAAACATTCACATCCCTGTCGCCGTGCAGACTGTAGGGGGCGCTTATTCTGGAACAACGCAGGCCCTGCATATATGGGATccacaacaacagcagcagcacgTGCAGGATGGAGAAGTACAGGAACAACAGCTCCATCTGCAGGCGCAGACCGAGGCAGAGCCACAGGTAGAGCCTCCTCCTGAGCTGGTCCTCCCAAACACGCTGAAGCCTGAGGACGGGCTAGAGGTCTGGAGGCTTTGGGTTCAGCGCAAAAATGCTGAGCTggacaaaaatgaacaaaataagcTGGCACCTATTGGACGTCGACAGCCGCTGCGCTTCCAGGACGATCTTGTGTCGAGTTCAGTGGGAGAGTTGAACCTGGCTCTGTCCCTGATGACTCAAGAGGCCCGTGGGCTGGAGGGAGAGCTGTTCGAACCCGATTCATTATactatgtatttttatgtatacaGAAATACATGTTTGAGAACGGCAGAGTAGACGACATCTTCTCTGATCAGTACTATAGCCGCTTCTGTCAGTGTTTACACAAAATTTTGGAGGAGTGGAGGCCCAGTATTCATCCTCTTGGCTATATCATCCCAAGTCACGTGACAGAGGAGATGCTGTGGGAATGTAAGCAGTTGGGAGCTCACTCACCAGCCACTCTCCTCACTACACTGATGTATTTCAACACCAAGTACTTTCACTTGACCACAGTGGAGCAGCATATGAAAGTGGCCTTCTCCAAAGTGCTCAGACATACAAAGAAGAATCCCACCAACCCTAAAGACAAGAGCACCAGCATCCGCTACCTGAAAGGAGTTGGACCACACCATGTCGGACAGAAAGTGACTGATGACATGTACGCAGAACAGGCTGAAGACCCCGAGAACCCGCTGCGCTGTCCCATCAAGCTCTATGACTTTTACCTCTTTAAATGCCCTCAGACTGCTAAGGGTCGCAATGACACGTATTACCTGACGCCGGAGCCTGTAGTGGCACCCAACAGCCCCATCTGGTACTCCACTCAGCCAATCACGAGCGAGCAACTGGAGCACATGCTAACACGCATCATGATGGTGCGGGAAATCCAAGAGATTATCTCCATCACGCAGACCAGCGTTCAATGA
>TCONS_00007786
GTAATAAGTGTGTTGTAAGTGGttgtGCTCCTGTACAGGGTGGACTGACCTGTCATGAATGAGCCCATTGAAGGCGGTGCGATCTCGTTCGACGAGTATGTGCGGCAGAAGGCGCGCACTATACCTCAGCACCGCATGAAAGAGTTCCTGGAGTCGCTGGCCTCCAAAGGCCCAGAGGTGTTGCAGGAGTTCAGCCAGCAGACCAGCGGCACCACAACCACAATGGTGTACCAACAGGGTGCCAACTGCATCTACACGGACAGCACAGAGGTGGCGGGCTCATTGCTGGAGCTGGCATGTCCGGTTCAGGTGACATCGACACAGATCTCACCCCAGCTGGCTGCAGCTGTGCATCAGGCATCTGAACAGCAGATCCAAGTACAGGTGCAGATTCAAGGTGAGCAGGGTCAGACAGTGGGCCAGGTACTTCAGGTGGCTTCTCCTACCCAACAGCAGCTACAAGGAGTTACTACAACACAGCTGGTACAACAGGGAGAGCTCACAgaggaacaacaacaacagATCCAGGCTCAGCTGGTGGCAGCAGTTGCCGGAG
>TCONS_00007787
AGCATTAATGCTAGCTTATTTTCGGGGCAAAGCATTGAGTGGTCCAGTAACGTTGCTTGATTTACCGTAAGCAAAGCGAgtttacaaacacacaaataccgTTTATGTTATGTGATCGTTCATATTAAGGTTTGGTTTGTGATTCGAGAGGAGCCTCAATACAGCTCTTTTATTTTGCTTCAAGGGGTCCAAAGTCCAGCAAGGCTCCTGTACAGGGTGGACTGACCTGTCATGAATGAGCCCATTGAAGGCGGTGCGATCTCGTTCGACGAGTATGTGCGGCAGAAGGCGCGCACTATACCTCAGCACCGCATGAAAGAGTTCCTGGAGTCGCTGGCCTCCAAAGGCCCAGAGGTGTTGCAGGAGTTCAGCCAGCAGACCAGCGGCACCACAACCACAATGGTGTACCAACAGGGTGC

Function

symbol description
qrich1 Orthologous to human QRICH1 (glutamine rich 1).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8204 Orthologous to human QRICH1 (glutamine rich 1).

Ensembl:

ensembl_id ENSDARG00000019797

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007782 False 3160 mRNA 0.51 12 17997403 18017918
TCONS_00007783 False 2936 mRNA 0.50 13 17997490 18107447
TCONS_00007784 False 698 lncRNA 0.48 3 17998053 18002279
TCONS_00007785 False 2154 mRNA 0.54 11 17998186 18015534
TCONS_00007786 False 556 mRNA 0.56 5 18010783 18020258
TCONS_00007787 True 419 mRNA 0.50 2 18015347 18017287

Neighbor

gene id symbol gene type direction distance location
XLOC_004080 twf2b coding downstream 15976 17965098 ~ 17981427 (-)
XLOC_004079 cishb coding downstream 32878 17959507 ~ 17964525 (-)
XLOC_004078 CR589944.2 coding downstream 88721 17906902 ~ 17908682 (-)
XLOC_004077 uba3 coding downstream 194266 17785182 ~ 17803137 (-)
XLOC_004076 tmf1 coding downstream 214473 17757342 ~ 17782930 (-)
XLOC_004082 LO018315.7 coding upstream 36838 18144285 ~ 18148488 (-)
XLOC_004083 mustn1b coding upstream 142362 18249809 ~ 18253111 (-)
XLOC_004084 stimate coding upstream 162866 18270313 ~ 18283886 (-)
XLOC_004085 SFMBT1 coding upstream 176501 18283948 ~ 18323059 (-)
XLOC_004086 prkcdb coding upstream 236443 18343890 ~ 18384534 (-)
XLOC_004063 CR854846.1 misc downstream 1869725 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 5305712 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 5375636 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 5406107 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 5484141 12512966 ~ 12513262 (-)
XLOC_004073 NA non-coding downstream 767550 17223850 ~ 17229853 (-)
XLOC_004072 CR769769.3 non-coding downstream 849942 17144309 ~ 17147461 (-)
XLOC_004071 CR769769.2 non-coding downstream 899470 17093753 ~ 17097933 (-)
XLOC_004070 NA non-coding downstream 906208 17081422 ~ 17091195 (-)
XLOC_004092 NA non-coding upstream 742479 18849926 ~ 18852369 (-)
XLOC_004093 NA non-coding upstream 980967 19088414 ~ 19091101 (-)
XLOC_004095 CT737428.1 non-coding upstream 1073005 19180452 ~ 19180555 (-)
XLOC_004096 BX511159.1 non-coding upstream 1308731 19416178 ~ 19416315 (-)

Expression


Co-expression Network