XLOC_004495 (AL929469.1)


Basic Information

Item Value
gene id XLOC_004495
gene name AL929469.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 5061567 ~ 5061697 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008975
TGAGCACTTTTAACAGGTCCTGGCTTTGTGCAGTAGGCCAGGATTTGGTAGCTGGTGCTTAAATTAAAACTCCCTATAGCGAAAACCACAGGCTGAGTGTGCCATGTTGGGCATTAATAGGGAGAACATCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100745

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008975 True 131 snoRNA 0.46 1 5061567 5061697

Neighbor

gene id symbol gene type direction distance location
XLOC_004494 AL929469.2 coding upstream 4211 5057221 ~ 5057356 (+)
XLOC_004493 AL929469.4 coding upstream 8989 5052443 ~ 5052578 (+)
XLOC_004492 AL929469.5 coding upstream 9870 5051562 ~ 5051697 (+)
XLOC_004490 arhgap27 coding upstream 16636 4971515 ~ 5044931 (+)
XLOC_004489 plekhm1 coding upstream 98414 4920451 ~ 4963153 (+)
XLOC_004496 prrt2 coding downstream 20062 5081759 ~ 5095774 (+)
XLOC_004497 AL929469.3 coding downstream 28118 5089815 ~ 5089930 (+)
XLOC_004498 cep55l coding downstream 40973 5102670 ~ 5113389 (+)
XLOC_004499 pde6c coding downstream 67548 5129245 ~ 5154099 (+)
XLOC_004500 lgi1b coding downstream 128079 5189776 ~ 5204629 (+)
XLOC_004485 NA non-coding upstream 226253 4834849 ~ 4835314 (+)
XLOC_004484 NA non-coding upstream 309715 4748571 ~ 4751852 (+)
XLOC_004512 NA non-coding downstream 1083008 6144705 ~ 6152579 (+)
XLOC_004513 NA non-coding downstream 1087310 6149007 ~ 6153121 (+)
XLOC_004514 NA non-coding downstream 1095266 6156963 ~ 6171928 (+)
XLOC_004515 NA non-coding downstream 1133473 6195170 ~ 6451609 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G134945 NA non-coding CM030138.1 CM030138.1 12160595 ~ 12161253 (+)