XLOC_004513


Basic Information

Item Value
gene id XLOC_004513
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 6149007 ~ 6153121 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010720
GACTGAACATTCTTGCTCGTTACCAGATGTGCAGTAACAAACAGAGAAGATACAGTAAATGTAGAGATTGTTCAGAAGGAAATAATCATCCAGATTATGgcataataataataataataataataataataataataatgtgtgttaTTGAATTTACTGTGTTCATTTATAAGTGTGCAGCTACTGACCTTTCCTGCCTGCTGTCAATTGAAGTGACTCAAACAGTGGCACAGATGCACAACAAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010720 True 246 lncRNA 0.33 3 6149007 6153121

Neighbor

gene id symbol gene type direction distance location
XLOC_004511 asah2 coding upstream 6334 6117682 ~ 6142673 (+)
XLOC_004510 sgms1 coding upstream 34711 6065661 ~ 6114296 (+)
XLOC_004509 g6pca.2 coding upstream 100721 6041575 ~ 6048286 (+)
XLOC_004508 si:ch211-131k2.3 coding upstream 142142 6002715 ~ 6006865 (+)
XLOC_004507 si:ch211-131k2.2 coding upstream 167430 5977777 ~ 5981577 (+)
XLOC_004514 NA coding downstream 3842 6156963 ~ 6171928 (+)
XLOC_004515 NA coding downstream 42049 6195170 ~ 6451609 (+)
XLOC_004516 dkk1b coding downstream 312436 6465557 ~ 6467675 (+)
XLOC_004517 CU184911.1 coding downstream 555008 6708129 ~ 6708243 (+)
XLOC_004518 tfam coding downstream 1100991 7254112 ~ 7263958 (+)
XLOC_004497 AL929469.3 non-coding upstream 1059077 5089815 ~ 5089930 (+)
XLOC_004495 AL929469.1 non-coding upstream 1087310 5061567 ~ 5061697 (+)
XLOC_004494 AL929469.2 non-coding upstream 1091651 5057221 ~ 5057356 (+)
XLOC_004493 AL929469.4 non-coding upstream 1096429 5052443 ~ 5052578 (+)
XLOC_004492 AL929469.5 non-coding upstream 1097310 5051562 ~ 5051697 (+)
XLOC_004520 FP102277.2 non-coding downstream 1266911 7420032 ~ 7420148 (+)
XLOC_004522 FQ311940.1 non-coding downstream 1407944 7561065 ~ 7561202 (+)

Expression


Co-expression Network