G105358


Basic Information

Item Value
gene id G105358
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 16423007 ~ 16424460 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141446
ATCTCTGTGCCCATCCTTCCCTGTTTTTTTCCATGCGATGGAATCCTATCATATATCTGCATAAGGATTTTGGCCACATAAGAAGCATGATGTCATGGTGTTGCCCATTGTTTTGGCCACACTCCCTCTTTATGAACCCATCTGAGAGCAGGGCAGCAGCAGGAGGCCTAAAGAATGAGCTAAGGAGCCCTCCCTCTGTGGCCACAATAGGAGCAGCTGCAAGGCGTTTGGGAAAAGTGTGACAACTAAAGAGCATTCAGGGCTTATTCAAGCACCGGCCTTGTGTCCCCTGCCTCCCCACCAATGGGGAGGTGGAGACAGAGATGGCCGTGAAAGGGAAAGGAATATGTTTGGGTTGCAAATTAGCCAAAACATTGGCTTTGACCCTGGGTGGGGTGtgagaaaaaggagaaaaaacttCCTACGGAGGTGATGGTGATGATACCCCAAGGCCTTTACtacaaaacaacatttttaatgAAGCTCAGGTTTAGGGGGGAGAATACCTTTACATTTTGACAACACTTTCATGGATTCTGAGAAATGACTAAATGTGTTCTTTAAACGAACACCCGCTTCTTATCTGACAGTAATCcaaatgtttgtctctgaaagaaaaaaaaccaccATTGACAATGCATCTGTGATGAAAGGCTCATTCATGACCTCACCAGCTTCCTCAGACAAGCTGTGGTTTTGGTGACATATGTGAGacttcccccctccccctcccctaaCCAGCCCACCCGCCTTTGTGTCTTTAGATTTCCTGTTGTCAGGAGGGAGGTTGGCAGGagtgtgttgtgtctgtatgtgtgtgaaagtCGTTAGGCATCTTTTATGATCCGATGAGGGAGCTTCGGAGGGAAGAAGCCCTAAGTCAATTGACCGGTCAGGGACATACAGCattgtgatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgacaatctAAATGTGGTGTGAGATAATGTCAAGATGCTATCCAAATGAGGCTGGATGCTGAAACAAGAAAAAATGAAAGTACAAACTTGCTTAAGTTTACTTCAGATATATTGAATCCCATATTTCTTATCATATTCTCACATTTTCAGTCGATATCAGTCAGTCAGAATTGACCATAACGTCATTTGCCAGTTTCACTATGATCCATTTAGCAACTGAGAGTCGTTTTAATTAACACAATCCAGAGGAAACATGGTTATATAATGTGTCAGAACTGCTGCCATGACAGAAAGAGACATAACCCCACCCTTCCCTTTTTACACAATCCAGTTTGGATCAAATATGTGGGAGTTGATGTaagttttcatgactttttctacaTCAGATATGACACATACCCACTTCCTTAAAAATTGAATTCTGTCACATGTACCTAAACAAGTTATATTAAAACTTTGACTAATATGGAATCAAATGACTCTGACTTTTGAAAGTTTTGCTACAAGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141446 True 1454 lncRNA 0.43 1 16423007 16424460

Neighbor

gene id symbol gene type direction distance location
dusp1 dusp1 coding upstream 642 16418997 ~ 16422365 (+)
flt4 flt4,LOC102787200 coding upstream 28576 16348110 ~ 16394431 (+)
trim105 LOC103356977,LOC104930064,LOC101464174 coding upstream 82194 16333678 ~ 16340813 (+)
mxd3 mxd3 coding upstream 107014 16310544 ~ 16315993 (+)
pdlim7 LOC104930052 coding upstream 464247 15921012 ~ 15958760 (+)
neurl1b neurl1b coding downstream 22865 16447325 ~ 16460092 (+)
mtnr1c gpr50,LOC104936099,LOC108242047 coding downstream 44473 16468933 ~ 16481192 (+)
pcdh20 LOC103370723,LOC104948493 coding downstream 520815 16945275 ~ 16948696 (+)
fut11 fut11 coding downstream 540598 16965058 ~ 16971301 (+)
cetn2 cetn2,LOC103391147,LOC102228171,LOC101061582 coding downstream 572179 16996639 ~ 16998964 (+)
G105312 ddx41 non-coding upstream 126720 16294401 ~ 16296287 (+)
G105305 NA non-coding upstream 136122 16286673 ~ 16286885 (+)
G105304 NA non-coding upstream 138419 16284295 ~ 16284588 (+)
G105302 NA non-coding upstream 151540 16271251 ~ 16271467 (+)
G105300 NA non-coding upstream 171142 16251438 ~ 16251865 (+)
G105408 LOC106612179,LOC103391157,LOC107672342,LOC107732609,LOC107680378,LOC107592272 non-coding downstream 164198 16588658 ~ 16599020 (+)
G105432 NA non-coding downstream 263023 16687483 ~ 16687730 (+)
G105434 NA non-coding downstream 263695 16688155 ~ 16688590 (+)
G105437 NA non-coding downstream 272262 16696722 ~ 16697181 (+)
G105442 NA non-coding downstream 329351 16753811 ~ 16754010 (+)
stc2a stc2 other upstream 1452883 14895961 ~ 14970124 (+)
atp6v0e1 atp6v0e1 other upstream 1531512 14889235 ~ 14891495 (+)
hspa9 hspa9 other upstream 1640341 14767371 ~ 14782666 (+)
rell2 NA other upstream 1785583 14618394 ~ 14637424 (+)
LOC120566515 NA other upstream 4389175 12028625 ~ 12033832 (+)
vma21 vma21 other downstream 72840 16497300 ~ 16505658 (+)
nlgn3a nlgn3 other downstream 375323 16799783 ~ 16926634 (+)
plp1a plp1,LOC101171500,LOC105925114,LOC101482362,LOC103471165,LOC103135636,LOC103135639,LOC104923184,LOC102202602,LOC108242072 other downstream 526552 16951012 ~ 16957410 (+)
G105536 NA other downstream 701895 17126355 ~ 17127785 (+)
G105542 NA other downstream 717523 17141983 ~ 17151507 (+)

Expression


Co-expression Network