G105442


Basic Information

Item Value
gene id G105442
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 16753811 ~ 16754010 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141561
ggaactcccactttccccacgaccctcccacgaacgcatattgaaagcgcaacttgtctcttctcgctcatgtggcagacaatctgcgattttacccaagtgcgccctgtttgtaaatagcccgcatcggttacgtccgtctttgcgaccaattagcgcctggaaacaggcgcaaacggcttgataaatctagccctcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141561 True 200 lncRNA 0.53 1 16753811 16754010

Neighbor

gene id symbol gene type direction distance location
mtnr1c gpr50,LOC104936099,LOC108242047 coding upstream 272619 16468933 ~ 16481192 (+)
neurl1b neurl1b coding upstream 293719 16447325 ~ 16460092 (+)
dusp1 dusp1 coding upstream 331446 16418997 ~ 16422365 (+)
flt4 flt4,LOC102787200 coding upstream 359380 16348110 ~ 16394431 (+)
trim105 LOC103356977,LOC104930064,LOC101464174 coding upstream 412998 16333678 ~ 16340813 (+)
pcdh20 LOC103370723,LOC104948493 coding downstream 191265 16945275 ~ 16948696 (+)
fut11 fut11 coding downstream 211048 16965058 ~ 16971301 (+)
cetn2 cetn2,LOC103391147,LOC102228171,LOC101061582 coding downstream 242629 16996639 ~ 16998964 (+)
fhdc2 LOC104948384,LOC103370727 coding downstream 291740 17045750 ~ 17055631 (+)
rhogd rhog,LOC104923191,LOC103370722,LOC101076287 coding downstream 303270 17057280 ~ 17060990 (+)
G105437 NA non-coding upstream 56630 16696722 ~ 16697181 (+)
G105434 NA non-coding upstream 65221 16688155 ~ 16688590 (+)
G105432 NA non-coding upstream 66081 16687483 ~ 16687730 (+)
G105408 LOC106612179,LOC103391157,LOC107672342,LOC107732609,LOC107680378,LOC107592272 non-coding upstream 154791 16588658 ~ 16599020 (+)
G105358 NA non-coding upstream 329351 16423007 ~ 16424460 (+)
G105477 NA non-coding downstream 227473 16981483 ~ 16984069 (+)
G105506 NA non-coding downstream 255721 17009731 ~ 17011507 (+)
G105509 ogt.1,ogt non-coding downstream 259740 17013750 ~ 17016013 (+)
G105532 NA non-coding downstream 363726 17117736 ~ 17118271 (+)
G105579 NA non-coding downstream 405528 17159538 ~ 17162598 (+)
vma21 vma21 other upstream 248153 16497300 ~ 16505658 (+)
stc2a stc2 other upstream 1783687 14895961 ~ 14970124 (+)
atp6v0e1 atp6v0e1 other upstream 1862316 14889235 ~ 14891495 (+)
hspa9 hspa9 other upstream 1971145 14767371 ~ 14782666 (+)
rell2 NA other upstream 2116387 14618394 ~ 14637424 (+)
nlgn3a nlgn3 other downstream 45773 16799783 ~ 16926634 (+)
plp1a plp1,LOC101171500,LOC105925114,LOC101482362,LOC103471165,LOC103135636,LOC103135639,LOC104923184,LOC102202602,LOC108242072 other downstream 197002 16951012 ~ 16957410 (+)
G105536 NA other downstream 372345 17126355 ~ 17127785 (+)
G105542 NA other downstream 387973 17141983 ~ 17151507 (+)
LOC120566324 LOC107089033,LOC103135614,LOC106925651,LOC106940816 other downstream 603498 17357508 ~ 17360262 (+)

Expression


Co-expression Network