G105959


Basic Information

Item Value
gene id G105959
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 18606410 ~ 18606924 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142287
TCTGAACGCGAGTCTTGTCCTCCTCAAACTGCTCCAGTTTCAACTTCCCTGCTCGTTCATTCCCAATGCAGAAGTCCACTggaccagtccactcagcctatCTGTCCCAATATAACCAGTCCcagtctctctgtcccactGCCTGCTCAATGTTTTCAAACATGTTGAGCTGAATGCGGCTCTGCCATCACAACTGTGACAAAGgttttttgtcacaaacagcAGGAAGGCCTCAAAAACACCTCACTGAAGGTAGAAGTTCCTCAGTGAACGCAGAAGCCTCTTAGCATTTAGCATACTAGCCagacccagaatgcacctgtgGGCGTGTTTGATTTGGGTCACTGAGCTTGCTTTGCCGGGTGGTGCATTTTATAATTGTATGATTGCTTTCGCCattttggattttttgtgtgaaGATTAGATGAAATATTTCATCATATCTTTACCAAACTTGGTAGGCCTACATATCATATGTAGATGACCCTCAacaaaacttttgtttttgtttttgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142287 True 515 lncRNA 0.44 1 18606410 18606924

Neighbor

gene id symbol gene type direction distance location
tmem126a LOC100708117 coding upstream 54704 18550081 ~ 18551706 (+)
phykpl phykpl coding upstream 208338 18393839 ~ 18398072 (+)
LOC120567061 NA coding upstream 439309 18161343 ~ 18167101 (+)
LOC120567062 NA coding upstream 449000 18091770 ~ 18157410 (+)
LOC120566284 NA coding upstream 528632 18070259 ~ 18077778 (+)
LOC120566670 NA coding downstream 10531 18617455 ~ 18620273 (+)
LOC120566726 NA coding downstream 437709 19044633 ~ 19048608 (+)
arl3l1 LOC103135527,LOC103354384,LOC104927064,LOC106905160,LOC100709097,LOC107094991,LOC102235273,LOC106517448 coding downstream 442459 19049383 ~ 19053015 (+)
LOC120567130 myoz3,LOC103354386,LOC102192149,LOC102796402 coding downstream 462482 19069406 ~ 19073864 (+)
LOC120567306 ndst1,LOC104927060 coding downstream 484374 19091298 ~ 19128318 (+)
G105944 NA non-coding upstream 52611 18552100 ~ 18553799 (+)
G105910 rack1,gnb2l1 non-coding upstream 193916 18408264 ~ 18412494 (+)
G105892 hnrnpab,LOC103359197 non-coding upstream 204315 18401266 ~ 18402095 (+)
G105894 NA non-coding upstream 205728 18365603 ~ 18400682 (+)
G105885 NA non-coding upstream 278044 18327015 ~ 18328366 (+)
G105985 NA non-coding downstream 59067 18665991 ~ 18674469 (+)
LOC120566919 LOC106517507,LOC108240586,LOC103471261,LOC106920872,LOC106964884 non-coding downstream 105576 18712500 ~ 18721760 (+)
G106006 NA non-coding downstream 308341 18915265 ~ 18920309 (+)
G106080 rbm22 non-coding downstream 467058 19073982 ~ 19075573 (+)
G106120 pdgfrb non-coding downstream 572014 19178938 ~ 19179637 (+)
gabra6a gabra6,LOC102779400,LOC100710435,LOC102294139 other upstream 706679 17890170 ~ 17899731 (+)
G105677 NA other upstream 920711 17682919 ~ 17685699 (+)
LOC120567259 LOC106925651,LOC106940816,LOC108240559,LOC106591805,LOC102211808,LOC100691901,LOC106613062 other upstream 1142188 17458247 ~ 17464222 (+)
LOC120566324 LOC107089033,LOC103135614,LOC106925651,LOC106940816 other upstream 1246148 17357508 ~ 17360262 (+)
G105542 NA other upstream 1454903 17141983 ~ 17151507 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other downstream 357010 18963934 ~ 18969946 (+)
G106237 spock1 other downstream 997916 19604840 ~ 19652474 (+)
LOC120566323 LOC102781894,LOC101481808 other downstream 1421939 20028863 ~ 20061338 (+)
G106465 LOC104955902 other downstream 1744797 20351721 ~ 20352167 (+)
hrh2a LOC103354784,LOC104948895 other downstream 2327805 20934729 ~ 20947415 (+)

Expression


Co-expression Network