G167912


Basic Information

Item Value
gene id G167912
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 22844032 ~ 22846246 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227631
TTAGGTTAAAAGGTTGAATCATATTTTCTCTGCAGATTTCACAGATGTTAAGAAATGGTACTTTAATTTGCCATGTCACGCTTGGACCTATTGTTCAAGATAAAAAACTCTTACCAGGTTAATATAGTCTTTTGACCTTAAGTTGGAACATTGTTGTATGTTTTGAATGTACAACCTAGCTGACTTTACTATTAGTGTGGATATATTTACATGCTTTCAAATGTAGCAGGTGACACTGAATTACAGCAAAACCTCTGAACAGACAGTGACGTACTTTAGTCCTGCGATAAAGGACACCATGTATGTGTCAGTAGACTTTTAGAATATAAACATCGATATgaaaatgcacataattgtgacaatattttaatgattttgtCTAACTTCTTATAAGCAAGTATTGGTACAGCTTAATGTACGTAAAGAGATTAACCTAGTGTTACAGTATTTTTAGAGGTATTATTACTATGAAATTTAATATATAATGTACTTCTTTGAGTGTCACAAACTCTGATAACTTTGAGTGCAGGTTAGTTGTAATACTTCACGTTTAGGTACGACAATTGATGTTTGTATCGTTTCTTGTACATTTTATGAGATTATTTccttttggtggaacattttcacTTAGATCAGGACATAAGCAGCACATTATATACTCACATaaactgtatttgtgtgtgtgatatggcAAACAATGCTGCATATTCTATATTCGTATTAACCTGCTGCTCCTCTGtccttttatattaaaaaataaggAAAACAACAATTTGGACACATTCAGATAATATGACAAATTCAAGActaaatgttccaccaaaggGATCTGGGCaattcttttgtcttttttttccaaatggctgtataattattattattgtctacTTGACAATACTTTTTACTGTTTGTAAATGTTAAATAATTGACATAGTTTTACAATAATGAATGTCTGAAAGGGACTAGTTTTGTGGTGTTTttgatatttaaaataaatgcataatgTAAGCCTACTTATGAATTATTTTAACAGGATGAATGCATATTTTGTCAGTTTGTTCAATGGAATATTAAGGCTGTAATGTCAGACTAGCACTCTGTTTGTTATGAATTCAATTGCAGTCGTGTCTTAAAATCTTTTCACCACTAATATTTTCTTTCAGTATTGATTCATTGACACACACAACCTTATTTCATGCAAGGGAACATACAGAAAATGAAATCCCCCGTTTACAGGTTTAAATTCAATTTAATGGTTAGAATAGAAAATACCACTTTATTTAATAAGTATTCATCCCTTTTTCCCgcaaaatttttttaaaactattttttatttatactttCTCTTTTAGCTATGGTTTAAAAGTGTAGttacatattttataatattCAAAAGTCATGCCAGGAGTTTTTGTACCAGATCCCATCAATGCAGGGTGAGGGATGTGCTATAAATGCCCATGTCCTAAACATAAAAGCTACACTTTAACACGTGTAGGTAACTTGTTACAATGTCTACTGTCCAGAAAAAATggtgctgaaacaattagttcattaatcatttagttgatcaaaagaaaatgtatcaaCTCTTCTGCTATCAATTAATTGTTTGAATCTTTGATCgtgcaaaaatgtcaaacactagttgcagcttctcaaatgtgacgatttgctgcttttctctttgGGGCAGCTGACTCAATCAATTGGAAAAGTAATCAACAGATGAATAgatgatgaaaataatgaaTTCAGTATCTTTTGTgtttattgcattttttaatgtatgtctgtgcatgcataTCCTCCCTATCTTCATCCTTGTTAAACATCCTCAACCATCAGTAACCAACTGTGTTTTGCCAGAATATGATATAAAGCAGTTTCTGATGCTAATGTGTAAAATCTTTCATTCAGCTGTTGGAGTCTCCTCTGTAAACTCTTGTATTCAAATCTAGTAATAATCTCAATATGCTCGTCGTGGCTACTGAGAGACACAACAGCACCAAAGGAAACTGTTGACCTCCAGTACTTATTGTATTTTCACAGCACTCAAAGAATGTTCTCTTTATTCTGCTGTGTTGTTGGAGGTAGAGGATGTTTCTTAGAGGTTGTATTGGATCATAGAAAACTTGTATCTTGAGCCCAATAAAAAGTGTGCAATAACAATCCATGTCTATAATATGTTGACAAAAGTGATTAAACagtaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227631 True 2215 lncRNA 0.32 1 22844032 22846246

Neighbor

gene id symbol gene type direction distance location
wdr44 wdr44 coding downstream 186469 22645085 ~ 22657563 (-)
lrch2 lrch2 coding downstream 214591 22594826 ~ 22629441 (-)
il13ra2 NA coding downstream 256393 22580317 ~ 22587639 (-)
LOC120544449 dcx coding downstream 287088 22529086 ~ 22556944 (-)
LOC120543725 capn6,capn5 coding downstream 320475 22512361 ~ 22523557 (-)
LOC120543586 LOC102792026,LOC101478344,LOC102213107,LOC100696094,LOC102309081 coding upstream 917 22847163 ~ 22870641 (-)
kat5a kat5 coding upstream 70856 22917102 ~ 22926382 (-)
abcg4a abcg4 coding upstream 81662 22927908 ~ 22946917 (-)
LOC120544448 hinfp coding upstream 106091 22952337 ~ 22957630 (-)
dpagt1 dpagt1 coding upstream 111668 22957914 ~ 22964518 (-)
G167905 NA non-coding downstream 22305 22821471 ~ 22821727 (-)
G167903 LOC103353295 non-coding downstream 29455 22811589 ~ 22814577 (-)
G167816 NA non-coding downstream 83485 22759200 ~ 22760547 (-)
G167786 NA non-coding downstream 112887 22643382 ~ 22731145 (-)
G167801 klhl13,LOC104946894,LOC102794736,LOC106603113 non-coding downstream 144062 22691627 ~ 22699970 (-)
G167929 h2afx,LOC104950138,LOC106516344,LOC100693699,LOC107677420,LOC105929328 non-coding upstream 140238 22986484 ~ 22987137 (-)
G167944 NA non-coding upstream 176207 23022453 ~ 23022914 (-)
G167945 LOC103359643,LOC102303727,LOC102193670,LOC102789144 non-coding upstream 183365 23029611 ~ 23033079 (-)
G167970 NA non-coding upstream 302695 23148941 ~ 23149405 (-)
LOC120544733 NA non-coding upstream 318261 23164507 ~ 23234317 (-)
G167902 NA other downstream 33580 22809714 ~ 22810452 (-)
mepcea mepce,LOC103353310,LOC101485584 other downstream 375416 22460531 ~ 22468616 (-)
chrdl2 chrdl2,LOC102798861 other downstream 397276 22440311 ~ 22446756 (-)
zbtb20 zbtb20 other downstream 593654 22218060 ~ 22250378 (-)
G167589 prdx4,LOC101470355 other downstream 845384 21996959 ~ 21998648 (-)
zmp:0000001168 sipa1 other upstream 33470 22879716 ~ 22912915 (-)
si:ch211-117m20.4 LOC104950135,LOC102215356,LOC102305874,LOC101475389 other upstream 103261 22949507 ~ 22951736 (-)
LOC120543557 NA other upstream 304598 23150844 ~ 23153409 (-)
slc12a9 slc12a9,LOC103370084 other upstream 580542 23426788 ~ 23437928 (-)
mink1 mink1,LOC100692298,LOC102200963,LOC107746403 other upstream 604447 23450693 ~ 23485871 (-)

Expression


Co-expression Network