LOC120543879


Basic Information

Item Value
gene id LOC120543879
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21155565 ~ 21169634 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777239.1
AGTCCCTCTTTCTGAACATCACTGCCCACTTTACAATAAATGTAGGGCTCCTGCAACATCCTCTTATTTTTATACTGTTCCCTGGTTTAAGTTTCAACATGGGATTTTCCATCCACTGGAGCTGGCTTGCTGCACTTTCATGTCTCCTCTGTATGGGAAATGAGGTTCGGTGTGATTGCACGGAGGAGAGAATGGAAATTGTAGGAGGTGATTACATACTGACCAAGCAGCTGAAGATAGGCAGCATGTTGGTCTACCAGTGTCCTGAGGGCTACTATCCATACCCGCATTTGACCCGTATATGTGAGCTGAATAGCATCTGGAAACCAGCGCCCAAAAGATTTTTCCCTCAGAGATGCAAGCGTGTTGAATGCCCCGACCCTAATGTGATGGAGTATGGAAACATCTTCCCTCCTCAGGAGAAGTACTTTGTGGACAATGAGACCACGTATGAGTGCTACTCTGGATACAGATTGCGTGGCTCCTCCAGACGTGTGTGCTTATCCAACGGGAAGTGGAGTGGCTTCACTCCCATCTGTAGCCGTGACACAGGGGATTCTTGTGCTGATCCTGGTATCCCACCTGGCGCCACAAGAGATGGGAACGCATTTGGAATTGACGACAAAGTGACTTACAGCTGCAATGGCGAACTGTTTTTGGTGGGGtcgagtgagagagtgtgtcaGGAGAACGGCCACTGGACAGGCAAAGAGCCAGCATGTTTCTACAAACACACCTATGATACTCCATTGGAGGTTTCACAGGAATTTGGCAGTGCGATCAAAGGCAGCCTAACCACTTTAGAGCCCATTGatGACACACAGGAGGGGAGAAAAATCAGGATTTCAAAAAATGGTACACTTAACATCTATATCGCAATGGATATTTCTGCGAGCATCGAAGAAAAAGACTTCAATAAGGCAAGAAATGCTGTCACAAAACTTATAGAAAAGATTGCATCCTTTACTGTGACTCCAAACTATGAAATAGTCTTTTTCTCCTCTGAAGTTTATGAAGTTGTCAGTATTCTTGATTTTTTGGATAAACAAATAACACTAAAAGCCATCCTGACGGAATTGGGAAATTTTAAAATAGGCGAGAGAAACACTGGAACAGATCTGAATGGCGTCTTTACAAGATTCTTGGAGCGAATGGCTATTATAAAGCAACAAGTTGGAGAAGAGCGTTTTAAGGAACATCGTCACGTCCTTATCTTTTTTACAGATGGTGCTTATAATATGGGCGGATCGCCTGCACCCACTGTTGAACAAATAAAGAACATGGTATACATGAACCAGACAGGTTCTCAATCGTATCAATCAAGAGAAGAATATCTGGACATTTATATTTTTGCCATTGGAGCGGAGGTCTTTGATAGCGACTTGCAGCCCCTCGCAACAGGTCCAACCAGTGAAAGGCATTACTTCAAAATGAAGGACATTGATAATTTACAAGAGACCTTTGATGAAATTATTGATGAAGAAGAAGTTAAGGGTCTATGTGGTCTTCACAAGGACTATGAATCAATACATAAAGGCAACAAGAGGCAAATGCATCCATGGTGGGCATCCATTACTATCAAGAATCAAGGATTGCCAAGGGACTGCCTTGGCTCTCTGGTGACCCCGAAGTTTGTCTTGACTGCCGCTCACTGCTTCACATTTGAAGATTTACCTGAGCACGTCAAAGTTGTTATTGATGATGGACAGGGCAAAGagaaaaaaattaaatctttCAAATTACACCCGGAGTACAATATCAATGCTAAAGTGAATAAGGGTGTGAAGGAGTTCTATGACTATGATGTGGCTCTCATCCAACTGGAGGAAGATGTTAACATCTCCAGTGCTGCTAGACCTATTTGCATACCTTGCACCCAGGAGACCAGTGATGCTTTAAAACTGGTTGGTGAATCCACCTGCAAGCAACAAGAGGAAATTCTGTTGAAGAATCATCTTGAAAGTCTCTCGTTCCTGAATAAGAAACAAGGGACGACGGTAGTTGTCAAAAATGTCACTGCTAAGATGGGCGACATTAGAGATGACTGCATCAAACATGCACTAGGGGCCCCAGGCATATCAACGAAAGATCCAAAGGAGGTTGTGACTGATAACTTTCTGTGCACTGGTGGTCAGACTCCTATTAGAGATGATATGTCATGTAAAGGTGACTCTGGAGGTGCTGTGTTCAAGAACTATGAGCATCGCACAATACAGGTTGCATTGGTCAGCTGGGGAACCACGGATTTGTGTGGGTTGGGAGGAGGTGACCTCCATACACGTCAGACCGCCAGAGATTTCCATATTAATCTTTTCAGAGTTGTTCCTTTTCTCAAATCGATCCTTGGAAATGACACACTTGACTACGCACCACTTACGTTTTTGAAAAGCTAAAATGTATTTGCATACTGTAATTTGGCATTCTGTAAACACTAGCTTATGTGATTTTGCTACTGATTTAAAGTTTTCTCAGACGTCATGtgctttcacaataaaaaagattacatttttCTCATGAAaagcatacataaacaaacatgttCACAAAAAAGCATGTCACATTCCCAAAATATCATGTACAGTCATGCAAATAGTCATGTAGTTTATCATTATTCAGTATTGTCAGTGGTCAATCAGGAtgtaaagaagttaaataatCAGTATAAACCTGCGTCTTGATGTTTTTGAAAAGCATCCAAATTGTTAATACCCTGGATCAGTGTTAGCAATGAGACAGTGAGACAATTTAGTAATACTAGTGTATTAGTCGTATATTTCGGTCCTTATTAACAATTTtccaaaaagatatataaaaatatgaaaataaagcaTTAAATTAAAAGGGAAACAAATAATATTAGCCGAAAAGGTGTAGGCTTAAGATTGGTGTATACCGACCATTTTTATATATCATATTCTAATAGACAACTCTTTCAATACTATTTAAATGTGTCTACCATTGTGCCATAATGAGCATACAATGCTAGCTATCATTTAATATTGCTGACTGTTAGAGCATTGTGCCCAATGTCGCAAAACCATTGTTTACTGTATGACAATATTGATCAAATATGATTTCTGTATCTTTATTTGTCAGGTAGTAAATTCACTGGTTCAGCCAA

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01335 CFB; complement factor B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777239.1 True 3121 mRNA 0.41 18 21155565 21169634

Neighbor

gene id symbol gene type direction distance location
LOC120544337 LOC102778915,LOC105355624,LOC106956155,LOC106921314,LOC103142148 coding upstream 10899 21122879 ~ 21144666 (+)
LOC120543552 LOC101467523,LOC105355624,LOC102778915,LOC106956155,LOC106921314,LOC103142148 coding upstream 37337 21110301 ~ 21118228 (+)
nectin1a LOC100707450,LOC102209168,LOC102791255,LOC102293356 coding upstream 49352 21088090 ~ 21106213 (+)
si:dkeyp-69c1.9 NA coding upstream 83537 21068672 ~ 21072028 (+)
trpc6a LOC104964660,LOC103355104,LOC102206828 coding upstream 107112 21037107 ~ 21048453 (+)
LOC120544469 NA coding downstream 38256 21207890 ~ 21234080 (+)
LOC120544596 dixdc1 coding downstream 65137 21234771 ~ 21248233 (+)
dlat dlat coding downstream 79223 21248857 ~ 21256900 (+)
zgc:165604 LOC103375428,LOC101483234,LOC100710403 coding downstream 91186 21260820 ~ 21266530 (+)
pygma LOC104936496,LOC103356782,LOC102785324,LOC102293037,LOC102211029,LOC101481199 coding downstream 266039 21435673 ~ 21446992 (+)
G167199 NA non-coding upstream 101552 21052635 ~ 21054013 (+)
G167196 NA non-coding upstream 122165 21033196 ~ 21033400 (+)
G167195 NA non-coding upstream 122817 21032368 ~ 21032748 (+)
G167123 NA non-coding upstream 230158 20924596 ~ 20925407 (+)
LOC120543783 NA non-coding upstream 291458 20855736 ~ 20864107 (+)
G167269 NA non-coding downstream 35128 21204762 ~ 21206867 (+)
G167374 NA non-coding downstream 280453 21450087 ~ 21450349 (+)
G167375 NA non-coding downstream 285853 21455487 ~ 21456441 (+)
G167376 NA non-coding downstream 288487 21458121 ~ 21458864 (+)
G167384 LOC103356783 non-coding downstream 306569 21476203 ~ 21493269 (+)
dynll2b LOC107089378,LOC101174042,LOC103395122,LOC106514090,LOC107387006,LOC103140945 other upstream 186750 20966862 ~ 20968815 (+)
nle1 nle1 other upstream 333005 20815276 ~ 20822560 (+)
mtnr1bb LOC103354484,LOC100701643,LOC101479329,LOC101074288,LOC103475521,LOC107386965 other upstream 1133033 19988882 ~ 20022532 (+)
map3k7cl map3k7cl other upstream 1309512 19835353 ~ 19846053 (+)
grik1a LOC101481540,LOC100699029,LOC104923829,LOC102784741 other upstream 1324540 19801593 ~ 19831025 (+)
layna layn,LOC100708261,LOC101467228,LOC104929931 other downstream 4360 21173994 ~ 21180752 (+)
si:dkey-71l1.1 LOC101485670,LOC102299221,LOC103355094,LOC102789525,LOC104929928 other downstream 22417 21192051 ~ 21197037 (+)
mia mia other downstream 32916 21202550 ~ 21204162 (+)
LOC120544432 NA other downstream 429449 21599083 ~ 21608848 (+)
LOC120544614 LOC103368254,LOC101478346,LOC103475446,LOC100706924,LOC104924602 other downstream 510499 21680133 ~ 21710377 (+)

Expression


Co-expression Network