pygma (LOC104936496,LOC103356782,LOC102785324,LOC102293037,LOC102211029,LOC101481199)


Basic Information

Item Value
gene id pygma
gene name LOC104936496,LOC103356782,LOC102785324,LOC102293037,LOC102211029,LOC101481199
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21435673 ~ 21446992 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778469.1
ATGTCTAAACCCTTGTCTGACCATGATAGAAGGAAACAGATTTCAGTGCGAGGCCTCGCCGGCGTTGAAAACATTTCACAATTGAAGCTAGATTTCAACAGACATCTCCACTTTACGCTGGTCAAGGACAGAAATGTGGCTACCAGAAGGGATTACTACTTTGCTCTTGCCAACACTGTGCGGGAGCACTTGATTGGCAGGTGGATCAGAACCCAGCAGCACTACTATGAGAAAGATCCCAAACGCGTGTACTACATCTCCCTTGAGTTCTACATGGGCCGCGCCCTTCAAAACACCATGGTGAACCTCGCACTGGAGAACGCCTGTGATGAGGCCATGTACCAGTTGGGTCTGGACATGGAGGAACTGGAGGACATGGAGGAAGATGCTGGCTTGGGAAATGGTGGCCTGGGACGCCTTGCCGCCTGTTTCCTGGACTCTATGGCTTCACTGGGTCTGGCTGCCTATGGTTACGGTATTCGCTATGAATTCGGTATCTTCAACCAAAAAATCATCAATGGCTGGCAGGTTGAGGAGGCTGATGATTGGCTGCGCTATGGCAACCCCTGGGAAAAGGCACGTCCTGAGTACATGCGTCCAGTGAACTTCTATGGCAGGACAGAGCATCACCCCGATGGTGTCAAATGGGTTGACACTCAGGTAGTGCTGGCTTTGCCATATGACACCCCTATCCCCGGCTACAGAAACAACGTTGTCAACACCATGAGGCTGTGGTCGGCGAAGGCGCCTTGCGATTTTAACCTAAAAGACTtcAATGTCGGTGGCTACATTCAAGCTGTTTTGGACAGAAACTTGGCTGAGAACATCTCCCGTGTGCTGTATCCCAACGACAATTTCTTTGAAGGAAAGGAGCTCCGTCTGAAGCAGGAATACTTTGTGGTGTCTGCCACCCTGCAAGACATCATCCGTCGTTTCAAGGTCTCTAAGTTTGGCTCCAGGGAGATTGCTCGCACAGACTTCAGCAAACTGCCTGACAAGGTTGCCATCCAGCTGAATGACACTCACCCAGCCATGGCTATTCCTGAGCTGATGAGGGTTCTGGTTGATGAGGAGAAACTTGAATGGGAAAAGGCATGGGACATCTGTGTGCGCACCTGTGCCTACACCAATCACACCGTACTTCCTGAAGCTCTGGAGCGCTGGCCAGTCGATCTGTTTGCTTATCTGCTGCCTCGTCACCTGGAAATTATATATGAGATCAACCGTCGCCACCTGGAGAGAGTTGCTGCCAAGTATCCTGGTGATCATAATCGTCTGTGCCGCATGTCCCTCATTGAGGAAGGCGGACAAAAGAAGATCAACATGGCCCATTTGTGCATTGTGGGTTCCCATGCTGTCAACGGCGTGGCCCAGATTCACTCTGACATCCTCAAAGCTACTGTTTTCAAGGACTTCTATGAAATGGAGCCACATAAGTTCCAAAACAAGACCAACGGCATCACTCCTCGACGCTGGCTGGTCATGTGCAACCCCGGGCTGGCTGAGGTCATCGCCGAGAGAATCGGTGAGGACTTCATCCGTGACCTCGACCAGCTGAAGGGTCTCTGCAAGTACGTGAATGATGAGGCTTTCATTCGTGATGTTGCCAAAGTGAAGCAGGAAAACAAGATGAAGTTTGCTGTCCACTTGGAGGAGCACTATAAGGTGAAGATCAACCCCAACTCCATGTTTGACCTACAAGTCAAGAGAATCCATGAATACAAGAGACAGCTGCTGAACTGTCTGCACATCATCACCTACTATAACCGCATCAAGAAGGAGCCTAACAAGCAGTGGACTCCAAGAACTATCATGATTGGAGGAAAGGCTGCTCCTGGATACCACACTGCCAAGATGATTATCCGCCTGATCACAGCTATTGGCGAGGTGGTCAACAATGATCCTGTGGTCGGGGACCGTCTCAAAGTCATCTTTTTGGAGAATTACAGAGTCACACTGGCAGAGAGAGTCATTCCCGCATCCGACCTGTCAGAGCAGATCTCCACAGCTGGCACTGAGGCCTCTGGCACCGGCAACATGAAGTTCATGTTGAATGGTGCTCTAACCATTGGTACCATGGACGGAGCCAATGTTGAGATGGCCGAGGAGGCCGGCATGGACAACATTTTCATCTTTGGCATGAGGGTGGAAGACGTTGATGCACTTGACAAGAAAGGTTACCACGCCGAAGAGTACTACAACCGCCTGCCTGAGCTAAAACAGGCTATTGACCAGATTGCTGGAGGCTTCTTTAGCCCAAAGCAGCCTGACCTGTTTAAGGAAATTGTCAACATGCTGATGCATCATGACAGATTTAAGGTCTTTGCTGACTATGAAGACTATATCAAATGCCAGGAGAAAGTCAATGCTCTTTACAAGAACCCCAAGGAATGGACCAAGAAGGTGATTTACAACATTGCCGGATGTGGCAAATTCTccagtgatcgcaccattgctCAGTATGCTCGTGAGATCTGGGGCATGGAGCCCACACTTGAGAAACTCCCCGCCCCTGATGATAAGCAATAAACTGTCCACATGATGGCACAACACCCCAACTTTCCCCGCTTGTATCGCAACACGGACGCCTTAAGAACCCATATGGTAGATACTGTGCGTCTGgtaaaagcccccaaaaaaccTGTGTCTAAAAGGGATTAGCATTAAATGCTTCCGCTTTACTACATTGTGTCTTA

Function

NR:

description
glycogen phosphorylase, muscle form-like

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0008184 glycogen phosphorylase activity molecular_function
GO:0030170 pyridoxal phosphate binding molecular_function

KEGG:

id description
K00688 PYG, glgP; glycogen phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778469.1 True 2696 mRNA 0.50 20 21435673 21446992

Neighbor

gene id symbol gene type direction distance location
zgc:165604 LOC103375428,LOC101483234,LOC100710403 coding upstream 169143 21260820 ~ 21266530 (+)
dlat dlat coding upstream 178773 21248857 ~ 21256900 (+)
LOC120544596 dixdc1 coding upstream 187440 21234771 ~ 21248233 (+)
LOC120544469 NA coding upstream 201593 21207890 ~ 21234080 (+)
LOC120543879 NA coding upstream 266039 21155565 ~ 21169634 (+)
slc22a6l LOC104936497,LOC103356784,LOC104961719 coding downstream 18251 21465243 ~ 21470028 (+)
puraa pura,LOC103395727,LOC107557059,LOC103356786,LOC107386391 coding downstream 115239 21562231 ~ 21571470 (+)
LOC120544431 NA coding downstream 118183 21565175 ~ 21589110 (+)
gng8 LOC107669366,LOC107567170,LOC107715333 coding downstream 296205 21743197 ~ 21745734 (+)
tmem45b tmem45b coding downstream 299138 21746130 ~ 21751622 (+)
G167269 NA non-coding upstream 228806 21204762 ~ 21206867 (+)
G167199 NA non-coding upstream 381660 21052635 ~ 21054013 (+)
G167196 NA non-coding upstream 402273 21033196 ~ 21033400 (+)
G167195 NA non-coding upstream 402925 21032368 ~ 21032748 (+)
G167123 NA non-coding upstream 510266 20924596 ~ 20925407 (+)
G167374 NA non-coding downstream 3095 21450087 ~ 21450349 (+)
G167375 NA non-coding downstream 8495 21455487 ~ 21456441 (+)
G167376 NA non-coding downstream 11129 21458121 ~ 21458864 (+)
G167384 LOC103356783 non-coding downstream 29211 21476203 ~ 21493269 (+)
G167444 NA non-coding downstream 275339 21722331 ~ 21724923 (+)
mia mia other upstream 231511 21202550 ~ 21204162 (+)
si:dkey-71l1.1 LOC101485670,LOC102299221,LOC103355094,LOC102789525,LOC104929928 other upstream 238636 21192051 ~ 21197037 (+)
layna layn,LOC100708261,LOC101467228,LOC104929931 other upstream 254921 21173994 ~ 21180752 (+)
dynll2b LOC107089378,LOC101174042,LOC103395122,LOC106514090,LOC107387006,LOC103140945 other upstream 466858 20966862 ~ 20968815 (+)
nle1 nle1 other upstream 613113 20815276 ~ 20822560 (+)
LOC120544432 NA other downstream 152091 21599083 ~ 21608848 (+)
LOC120544614 LOC103368254,LOC101478346,LOC103475446,LOC100706924,LOC104924602 other downstream 233141 21680133 ~ 21710377 (+)
dnajc18 dnajc18,LOC101477689,LOC100707186,LOC104924601 other downstream 266951 21713943 ~ 21720865 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other downstream 317209 21764201 ~ 21770754 (+)
sms sms other downstream 376661 21823653 ~ 21848098 (+)

Expression


Co-expression Network