G167444


Basic Information

Item Value
gene id G167444
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21722331 ~ 21724923 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU226940
GTTCAATGAAGatttattgtttaaacatttcCACCAAACAGTTTAATAACATGACGTTTTctcaaaaatactgaaattgaCTAAGAATATGCATGTCGGTACTGGTTCACAGGAAGTCTAGCCTAGATGAAATCAATTAGGCACAAACAATACAGCCATATTTAAAAATGATCTGAACGTTTTTAAAATtagaaaactaaaaaacaaaactcaAATGATCccatacaaaaaatgaaaatgtttctgtttgaaATTAGTATGACCATTTACAACTTCTAAATTAATCAGACTCTTTGGCCTCTGGTTTAACATATCATCACCAACATGGTATGTTTTCACAAAATCAACCACACTAATCTGAAGTTTAACCAGAACTCATGCAGGTTTAATTTCAGAGTAACTTTTATCTTCATTTATACAACCTGATGTAATTCAGAGCAGGCTAAGCCTAAGTGATCTGCACCACTGTAATCTGGGATTATACAGTTTGTAATCCATGTCTGTATGGCTGTCTCAGAGGAAATAGGCTTCTCCATGTCACAGTCTATTTAATTTAGAGTGCAAATAAGGTTATACTGCATTTTATGCAGAGTGAGAATCGGTGCAACTGACAGAATAAGTTCAGTCTTGTGGCTTCACACCTTTCACTTCAACCCAGCGACACTATTGTATACTGTCCTCATACTGTTTGTTCATTTCTTCATCTTGAGGTCAGCTTCTATGGCACAACGGCGCCCCCTGGTGCCTCCATCCTGCAGTCTTGTCAGTAGAGTCCTGTTTGCGTGTGCTCTCACGGCCCCTCAGGCTCTTGGCGCTGATACCAGACTCTGACGTCTCCATGATAAGCTGGGTAGCCAGAAACTGCTGGATCTGCTCCAGGACATCACGCTGCATCTCCAGAGCCATGTGGTACACGTCATGATCCAGGCTGTTGTACATGACCGCATTCTGAAACATCAGCATGATGTCCCTCTGGAACTCGGCCGTGGTCCGAATCACACCAGTCTCAATGTTCTTTTTTATGGCGGCAAGGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226940 True 1036 lncRNA 0.41 2 21722331 21724923

Neighbor

gene id symbol gene type direction distance location
LOC120544431 NA coding upstream 133221 21565175 ~ 21589110 (+)
puraa pura,LOC103395727,LOC107557059,LOC103356786,LOC107386391 coding upstream 150861 21562231 ~ 21571470 (+)
slc22a6l LOC104936497,LOC103356784,LOC104961719 coding upstream 252303 21465243 ~ 21470028 (+)
pygma LOC104936496,LOC103356782,LOC102785324,LOC102293037,LOC102211029,LOC101481199 coding upstream 275339 21435673 ~ 21446992 (+)
zgc:165604 LOC103375428,LOC101483234,LOC100710403 coding upstream 455801 21260820 ~ 21266530 (+)
gng8 LOC107669366,LOC107567170,LOC107715333 coding downstream 18274 21743197 ~ 21745734 (+)
tmem45b tmem45b coding downstream 21207 21746130 ~ 21751622 (+)
LOC120543655 ryr1,LOC103368261 coding downstream 45740 21770663 ~ 21821936 (+)
phldb2a LOC103368264 coding downstream 162848 21887771 ~ 21904548 (+)
lipia NA coding downstream 220472 21945395 ~ 21952073 (+)
G167384 LOC103356783 non-coding upstream 229062 21476203 ~ 21493269 (+)
G167376 NA non-coding upstream 263467 21458121 ~ 21458864 (+)
G167375 NA non-coding upstream 265890 21455487 ~ 21456441 (+)
G167374 NA non-coding upstream 271982 21450087 ~ 21450349 (+)
G167269 NA non-coding upstream 515464 21204762 ~ 21206867 (+)
G167544 LOC103353342 non-coding downstream 196359 21921282 ~ 21923414 (+)
LOC120543580 NA non-coding downstream 206320 21931243 ~ 21933808 (+)
G167549 NA non-coding downstream 212766 21937689 ~ 21937949 (+)
G167557 NA non-coding downstream 250959 21975882 ~ 21977416 (+)
G167559 map7d2 non-coding downstream 256419 21981342 ~ 21982252 (+)
dnajc18 dnajc18,LOC101477689,LOC100707186,LOC104924601 other upstream 1466 21713943 ~ 21720865 (+)
LOC120544614 LOC103368254,LOC101478346,LOC103475446,LOC100706924,LOC104924602 other upstream 11954 21680133 ~ 21710377 (+)
LOC120544432 NA other upstream 113483 21599083 ~ 21608848 (+)
mia mia other upstream 518169 21202550 ~ 21204162 (+)
si:dkey-71l1.1 LOC101485670,LOC102299221,LOC103355094,LOC102789525,LOC104929928 other upstream 525294 21192051 ~ 21197037 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other downstream 39278 21764201 ~ 21770754 (+)
sms sms other downstream 98730 21823653 ~ 21848098 (+)
kif20a kif20a,LOC102778170 other downstream 409584 22134507 ~ 22144199 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other downstream 669593 22394516 ~ 22422054 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other downstream 896470 22621393 ~ 22645826 (+)

Expression


Co-expression Network