G167557


Basic Information

Item Value
gene id G167557
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21975882 ~ 21977416 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227112
acCGAAAGTCAGAGGTTTAATAAATTAAAGTTGAAAAATCACATAATCAGCAGGTGCTTAAAGGCGACGGGACTACTGTACGAGAACGGGGGACGTCTCTTACAGTACCTTCAAGTCAGCTTCACCCTTCCTAGTTCTCTTCATGATCTCTTCAATTCTCTTTTTCCTCAGTtgcctctcctcttcttcttgttGCTTCTGCAGTTCTCTGTCTTGCCGCTGACGCGCTGTGTCGACCTGAGCCTTGACTTggactttttctctCTCTTTGTTCATCTGGGTCTGTAGCTCCTGCTCCTCCTTCTTTTGTTTGTCTTCTTCTTGTTTCAACCTGTGAAGATCTTCCTCATTTTTCCCATTTTGCTTCACTTGCTGAGCCTTTGCCTCCTGCTGTCGCTGCTCCTGTGCGAGTTGCTTCCTCAGCTGCTCTTTCCTTAGTCGTTCTTCTTCCTCTTGTTCACGCTTTTTCTCTTCCACTTCTTTCTGAGCCCGAGCCTGACGCCTACGCTCTGCCAGCAACCTGGTAGCCTCCTCTGCATTCGTTGTGCCAGCTGCTACCTTCCCTGTGGACGAGCATGGTGCTGATTctTTTTTTCTTGTCTCCATCCTGAGCGTTGCTCTGCGTCTTCTTCTCTGAGGAATCCACTTTGGGGGACACGTGGTCCTTTCTGTCAGGGGACTGGTTTTTTTCAGATGTGTCACCTTTGAAATGCCTATCCAAGGTTTCACCTTTAGAAGATCTGAGTTTAATGCTTTCAGTGTTGACCACATTCTTCTCATCTTGTGAAGATGGATTTGTGCTGTTGATGTCAGTATTCTTTTTCTCTGCTTTGGATTGTTCACTGGGTTTCTCCACCTTCTTGTCTTCTGCTTTCCTCTCATCAGGTGACAGGTTTGGACGATGTCTTGTAGGAGAGTTATGGTACTGATGTGCATTGCTGGGAGACTGGGCACGCATCTTAGATGCCAGcctgcacacagagagagatgttTGGCTTAAGGgtagacactacaggtgaatagggtaaaGATTTTAACTAATAGATAGCACCATGAAAATTCCCCAGTAATATAAATGTAAAGGCTATGATATATGATCAAAcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227112 True 1104 lncRNA 0.46 5 21975882 21977416

Neighbor

gene id symbol gene type direction distance location
lipia NA coding upstream 23809 21945395 ~ 21952073 (+)
phldb2a LOC103368264 coding upstream 71334 21887771 ~ 21904548 (+)
LOC120543655 ryr1,LOC103368261 coding upstream 153946 21770663 ~ 21821936 (+)
tmem45b tmem45b coding upstream 224260 21746130 ~ 21751622 (+)
gng8 LOC107669366,LOC107567170,LOC107715333 coding upstream 230148 21743197 ~ 21745734 (+)
pdha1a pdha1,LOC103353336,LOC104965989,LOC102234273 coding downstream 8195 21985611 ~ 21994474 (+)
prdx4 prdx4,LOC107386417,LOC102782956,LOC101470355,LOC108237004 coding downstream 18020 21995436 ~ 21998516 (+)
LOC120575707 LOC104965991,LOC104935631,LOC100709878,LOC101470058 coding downstream 23149 22000565 ~ 22001935 (+)
LOC120544110 zfx,LOC101469595,LOC102299651,LOC100691538 coding downstream 25392 22002808 ~ 22015678 (+)
gsx1 gsx1,LOC102779870 coding downstream 106552 22083968 ~ 22085457 (+)
G167549 NA non-coding upstream 37933 21937689 ~ 21937949 (+)
LOC120543580 NA non-coding upstream 42074 21931243 ~ 21933808 (+)
G167544 LOC103353342 non-coding upstream 52468 21921282 ~ 21923414 (+)
G167444 NA non-coding upstream 250959 21722331 ~ 21724923 (+)
G167384 LOC103356783 non-coding upstream 482613 21476203 ~ 21493269 (+)
G167559 map7d2 non-coding downstream 3926 21981342 ~ 21982252 (+)
G167564 LOC104935632,LOC104965992,LOC103353333 non-coding downstream 38659 22016075 ~ 22017905 (+)
G167569 atp6v1a,LOC106526133,LOC108236878,LOC100710668,LOC101468244 non-coding downstream 52881 22030297 ~ 22031640 (+)
G167649 NA non-coding downstream 238117 22215533 ~ 22216464 (+)
G167651 NA non-coding downstream 240665 22218081 ~ 22227298 (+)
sms sms other upstream 127784 21823653 ~ 21848098 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other upstream 205128 21764201 ~ 21770754 (+)
dnajc18 dnajc18,LOC101477689,LOC100707186,LOC104924601 other upstream 255017 21713943 ~ 21720865 (+)
LOC120544614 LOC103368254,LOC101478346,LOC103475446,LOC100706924,LOC104924602 other upstream 265505 21680133 ~ 21710377 (+)
LOC120544432 NA other upstream 367034 21599083 ~ 21608848 (+)
kif20a kif20a,LOC102778170 other downstream 157091 22134507 ~ 22144199 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other downstream 417100 22394516 ~ 22422054 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other downstream 643977 22621393 ~ 22645826 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other downstream 1864117 23841533 ~ 23918477 (+)
G168226 thoc2 other downstream 1949926 23927342 ~ 23928481 (+)

Expression


Co-expression Network