LOC120544432


Basic Information

Item Value
gene id LOC120544432
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21599083 ~ 21608848 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU226872
GAGCTAAAGCTGcaaactgctcactcagtggAAATATAAGCATCCCAGCCAGAATGATTTTCCTGCAGTCCCATTACCACACCCACAGCACATATATGTTTCTAAAATACGTTTTGCAATATTTGATATGATTAACTCTTACTTAACTCTTAAACTCTTGCTCTGTTCTTCCCTGCTCATTCAAGTACTGAACTGACTCAAAGTTAAGGAGGATGACGTGTCGCCTCTAGTATCATCTAACATGGCACTGTCTCTCCCAACAGGGGAAGTGTGGGGAGACGAGCACGTTACTCCCTCTGCCGCCTGAGTCGAAGTCAGCCAGTGCGACTGAGGAGAAGTCAGTTCCCCAGTCCTCCATCTGCTCCAGGCCTCCCATGAGAGCTAGCCCTGTCAATGTGAGACCATCTTCTGCAAATGCAGCACCAGGCTCTGTCAACACGAGACCTGGCCTGGCAAATCTGAGGCTGGCCACCGATGCACAATCCCCTTCCCCCAGCAGCGCTGTCAAAATAGACTCTGGAACAACCAAAGGTGGCCTGCACTCACAGGAACCTCACAAGCCCCAGGAATCACAGGGTGGGAAAGATATTGGTGCATCAGAAGCATCTCGGAGGGCTGCCTTGGTGCAGGCCGGGTCATCAGGGAGCACACCAACCTGCGCAGGGCGCGGCCGGGTAGCTCAGCTGATGAAAACCTTCAGTGCCGAAAGCACTACAACCCCCACACAGACCCCCTCTCGCAGCATCAAGCCTCCTCTCCCCACCAAGCCTAGCCACTTGCGTCTAACGACCACACCTACTGTCAGGTAATCCTCACACACTGATGCAGAGACGCCCACCAAGCTTCAAGCATCCCAGTGATTCAAATAAAGACACACTGGACAACGTCAGGCCCCTAATTTGGAGCTTCAGCCAGTGGGTTAATTCCCAAAGGTGGAAAAGAAGAACATGGTAATGTTCACAATGTTGCTGTCACTCCTAAACCCAGCAATGGAAATGCTTGAATGtaatggttttattttattattggaTGCTGCAGTACTGTAAACACTCTTTGTGGGAAAGAAATTCCAAAGCAATTGAATGCAATGTATATGTATTTTTCCAGGGAATTGATGACTATCACATTTATTCACTTGGTGTTGATGCTTTGCGGCTGGGCGTGTGAACACACAATTTCTTGTCCAATTCATAAACCCTATAAACACAATATTGTTACCATTGACATTATTTGTATTACTTATGACCAGACCCAAACAGAATCTGAggattttgggttttttttttgtttacagttttcAGCAGTGATCTAGAATGAAAATCTGTGGAATTTAGTCTGactgtttttctgcttgtggtggagatgtgttaacattctgaattttgtttgaattttttttgcattgtttctTATGAGACAGTTTGCATGAGCGCATATGCAGATACACGAGTGACAACAGAATGGGCATGGGCAGGCATAATGAGGTGGAATAAGGCACAGTAGGGTCCTCCTTCATCTTGCTGTCTCCTCTTTGGGAATACTCTAAGGTTGTTTATTTGTCACAATGCAATGTATGTCTCCCTCTGCCACCTGGCAGGAGCTTCACTGTGACCTGTTGTGGACCAATGACAGTGCCAAATTCATCGTCTGTCACTCCCAGTGGATCAAGTTAGACAGTTGATGCCAAATAATCCAGTGTTACTCTTCTGCATTTTTTTCAGTACTATTCTAGATATGTGCGgttgtacatttttacattttctataGGGGGAAATATGTTTTGTAATGGGATGTTTAACATTACTACGATGC
>XM_039778165.1
GGGAAGTGTGGGGAGACGAGCACGTTACTCCCTCTGCCGCCTGAGTCGAAGTCAGCCAGTGCGACTGAGGAGAAGTCAGTTCCCCAGTCCTCCATCTGCTCCAGGCCTCCCATGAGAGCTAGCCCTGTCAATGTGAGACCATCTTCTGCAAATGCAGCACCAGGCTCTGTCAACACGAGACCTGGCCTGGCAAATCTGAGGCTGGCCACCGATGCACAATCCCCTTCCCCCAGCAGCGCTGTCAAAATAGACTCTGGAACAACCAAAGGTGGCCTGCACTCACAGGAACCTCACAAGCCCCAGGAATCACAGGGTGGGAAAGATATTGGTGCATCAGAAGCATCTCGGAGGGCTGCCTTGGTGCAGGCCGGGTCATCAGGGAGCACACCAACCTGCGCAGGGCGCGGCCGGGTAGCTCAGCTGATGAAAACCTTCAGTGCCGAAAGCACTACAACCCCCACACAGACCCCCTCTCGCAGCATCAAGCCTCCTCTCCCCACCAAGCCTAGCCACTTGCGTCTAACGACCACACCTACTGTCAGGTAATCCTCACACACTGATGCAGAGACGCCCACCAAGCTTCAAGCATCCCAGTGATTCAAATAAAGACACACTGGACAACGTCAGGCCCCTAATTTGGAGCTTCAGCCAGTGGGTTAATTCCCAAAGGTGGAAAAGAAGAACATGGTAATGTTCACAATGTTGCTGTCACTCCTAAACCCAGCAATGGAAATGCTTGAATGtaatggttttattttattattggaTGCTGCAGTACTGTAAACACTCTTTGTGGGAAAGAAATTCCAAAGCAATTGAATGCAATGTATATGTATTTTTCCAGGGAATTGATGACTATCACATTTATTCACTTGGTGTTGATGCTTTGCGGCTGGGCGTGTGAACACACAATTTCTTGTCCAATTCATAAACCCTATAAACACAATATTGTTACCATTGACATTATTTGTATTACTTATGACCAGACCCAAACAGAATCTGAggattttgggttttttttttgtttacagttttcAGCAGTGATCTAGAATGAAAATCTGTGGAATTTAGTCTGactgtttttctgcttgtggtggagatgtgttaacattctgaattttgtttgaattttttttgcattgtttctTATGAGACAGTTTGCATGAGCGCATATGCAGATACACGAGTGACAACAGAATGGGCATGGGCAGGCATAATGAGGTGGAATAAGGCACAGTAGGGTCCTCCTTCATCTTGCTGTCTCCTCTTTGGGAATACTCTAAGGTTGTTTATTTGTCACAATGCAATGTATGTCTCCCTCTGCCACCTGGCAGGAGCTTCACTGTGACCTGTTGTGGACCAATGACAGTGCCAAATTCATCGTCTGTCACTCCCAGTGGATCAAGTTAGACAGTTGATGCCAAATAATCCAGTGTTACTCTTCTGCATTTTTTTCAGTACTATTCTAGATATGTGCGgttgtacatttttacattttctataGGGGGAAATATGTTTTGTAATGGGATGTTTAACATTACTACGATGCTCACTtgtaaaattaaacatttttatctttttgATTTCAAGTTTGTATGGTGCAATCAAAGAAACAATAAAATTGTGTAACTTGTACACCTACTcttaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226872 True 1812 TUCP 0.45 3 21599083 21608747
XM_039778165.1 False 1650 mRNA 0.45 3 21599346 21608848

Neighbor

gene id symbol gene type direction distance location
LOC120544431 NA coding upstream 9973 21565175 ~ 21589110 (+)
puraa pura,LOC103395727,LOC107557059,LOC103356786,LOC107386391 coding upstream 27613 21562231 ~ 21571470 (+)
slc22a6l LOC104936497,LOC103356784,LOC104961719 coding upstream 129055 21465243 ~ 21470028 (+)
pygma LOC104936496,LOC103356782,LOC102785324,LOC102293037,LOC102211029,LOC101481199 coding upstream 152091 21435673 ~ 21446992 (+)
zgc:165604 LOC103375428,LOC101483234,LOC100710403 coding upstream 332553 21260820 ~ 21266530 (+)
gng8 LOC107669366,LOC107567170,LOC107715333 coding downstream 134349 21743197 ~ 21745734 (+)
tmem45b tmem45b coding downstream 137282 21746130 ~ 21751622 (+)
LOC120543655 ryr1,LOC103368261 coding downstream 161815 21770663 ~ 21821936 (+)
phldb2a LOC103368264 coding downstream 278923 21887771 ~ 21904548 (+)
lipia NA coding downstream 336547 21945395 ~ 21952073 (+)
G167384 LOC103356783 non-coding upstream 105814 21476203 ~ 21493269 (+)
G167376 NA non-coding upstream 140219 21458121 ~ 21458864 (+)
G167375 NA non-coding upstream 142642 21455487 ~ 21456441 (+)
G167374 NA non-coding upstream 148734 21450087 ~ 21450349 (+)
G167269 NA non-coding upstream 392216 21204762 ~ 21206867 (+)
G167444 NA non-coding downstream 113483 21722331 ~ 21724923 (+)
G167544 LOC103353342 non-coding downstream 312434 21921282 ~ 21923414 (+)
LOC120543580 NA non-coding downstream 322395 21931243 ~ 21933808 (+)
G167549 NA non-coding downstream 328841 21937689 ~ 21937949 (+)
G167557 NA non-coding downstream 367034 21975882 ~ 21977416 (+)
mia mia other upstream 394921 21202550 ~ 21204162 (+)
si:dkey-71l1.1 LOC101485670,LOC102299221,LOC103355094,LOC102789525,LOC104929928 other upstream 402046 21192051 ~ 21197037 (+)
layna layn,LOC100708261,LOC101467228,LOC104929931 other upstream 418331 21173994 ~ 21180752 (+)
dynll2b LOC107089378,LOC101174042,LOC103395122,LOC106514090,LOC107387006,LOC103140945 other upstream 630268 20966862 ~ 20968815 (+)
nle1 nle1 other upstream 776523 20815276 ~ 20822560 (+)
LOC120544614 LOC103368254,LOC101478346,LOC103475446,LOC100706924,LOC104924602 other downstream 71285 21680133 ~ 21710377 (+)
dnajc18 dnajc18,LOC101477689,LOC100707186,LOC104924601 other downstream 105095 21713943 ~ 21720865 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other downstream 155353 21764201 ~ 21770754 (+)
sms sms other downstream 214805 21823653 ~ 21848098 (+)
kif20a kif20a,LOC102778170 other downstream 525659 22134507 ~ 22144199 (+)

Expression


Co-expression Network