puraa (pura,LOC103395727,LOC107557059,LOC103356786,LOC107386391)


Basic Information

Item Value
gene id puraa
gene name pura,LOC103395727,LOC107557059,LOC103356786,LOC107386391
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21562231 ~ 21571470 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778166.1
CGTGTGTCGCTCTCCGTGCCACGACTCGCCGTTTCTTGTCCATCTTGTGAAGCAAGCAGAAGCAGTCCGCTGTGGCGTCATAAAGGCCTCCATGCGCATTCACATGTGTCTTGTTTTCCTTGTCTCGTCTTCTGCTGCACACCGTCGAGGCTTTAAGGCGCTCCCCACTTCAGACCAAGCGGTGTAAGATCTCGCGAGAGTTCCTTTCGTTTGCTGTGGCTGACCGTGGCTTTGCagcagacagagggagaaggcaggcaggcagcatCATGGCGGACAGAGACAGTGGTAGTGAGCAGGGAGGAGCAGCCACGGGCCCAGGCTTCGGTCCCGTGAACCCAGCGACAGGAGGGGCGGGCTCGGCTTCCGGGCTCCAGCATGAGACACAAGAGCTGGCGTCGAAGCGGGTTGACATCCAAAACAAACGCTTCTATTTGGACGTTAAGCAGAACGCGAAAGGCCGCTTCTTGAAGATAGCAGAAGTCGGGGCCGGTGGAAACAAGAGCCGCCTCACTCTCTCCATGTCTGTGGCGGTCGAGTTCCGTGACTACTTGGGGGACTTCATCGAACATTATGCCCAGCTGGGTCCGAGCAACCCGGCGCTGGTACAAGACGAACCCAGGCGAGCACTCAAAAGCGAGTTCTTGGTCCGAGAAAATCGGAAATACTATATGGATCTGAAAGAGAACCAGAGGGGACGGTTTCTGAGGATTCGACAGACCGTTAACCGGGGGCCCGGTTTGGGATCCACGCAAGGCCAGACGattgctttgcctgcccagggACTTATTGAGTTTCGTGACGCTTTGGCTAAACTTATTGACGATTACGGTGTAGAGGACGAACCTGCAGAGTTGCCAGAAGGATCATCATTGACTGTGGACAACAAACGGTTTTTCTTCGACGTCGGATCCAATAAGTATGGTGTGTTCATGAGGGTAAGCGAGGTGAAGCCAACGTACCGCAACTCAATTACGGTGCCCTACAAAGTGTGGTCCAAATTTGGGATTACTTTCTCTAAATATGCCGAGGAGATGAAGAAGATCCAGGAGAAACAGCGGGAGAAAAGGGCATGCGAGATGCAGCAACAAGAGGAGATGCAGGCGGACGATGGAGACGAGGATTGATGtagatagcaaaaaaaacatgcaagagtaatgaaaataacaagagaaatataattaaaaactCTACTGTATAAAGAAAGAAATCTAAAGATTTAACTGTAATGGTTTAACTCCAAGGGAGCATCACCCACAATATAAGAAACCTCCACAACCTGACAGTTATGACATGTTGTCTCATCGCTGGATGTTATCCCACTTATCCACCATTAATACAGTAACAGGCTGCTAAACAAAGTAATAACATTATATTTGAACATTGTTTCCTACTTGACAAACAATATTGAACTGAGtgtttatttcccttattaacaGAAAACTTTTGTACCAGTTAAAgctattgtaaaaaaaaaaaatgtttgcaatgTTCAAATTCCGAGCACCGAGGAAAAACAGTTTCCTTTTCAAGCTAATGACTTCAGCACAAATcagatatttaaatttttaaaaccaaaattCAAAAACTGTGTAAAAGGTTGTCACATGTACTTGCCATCCTATTTACCTTTTACCTGTGAGTACAGATGTGTTTACACATAAATCATATGAGGGCTAGGCCTGCTTCGAAAACTGGTTAGATGTCATGCAGTATAAAAGGAACATATAAGCATTTTCATCAAATGAAATAAGTGCTCTATTTGTCGTGCAATATGCATTGCATACAAATCAAATATATTGAACTGGTCAATGGATCTTGACATGGTGACGTTTGCCAGAGGCATTCAAAGAAATATTAATATTGTAATTTTGTTTCAGTTGAAATTGTTGCCATGCAGATGGATATATTATAGACTACCTTTGTGTCTCGTTGTTAATGCAATGTGTTCATTTTAAAGGTACTAAATGTGTAATCGATAGAGGAAATGCAGTGACAACATGTAGCAAATGGCCTGAATTGCAGATTACTTAACAAGACAACTCCCTACACATACTGTGCTGATTGGCTTAGTGGTCTGAAAAAAAGATGCAAAATTCAGAAGAGCATTATTGGTTAGTACATCTGAAACATTTTGTGATCTTGTTCAGTCATAAAAGTCCAAATGGTGCCAAGGAGTGCTGTTGCTGCATGCTCATCTGCACTAAGACAGATTTCGTTGGTCTCCCAAAATATTGGCTCAAGGACCCTTCCATATGTATCTTTATCTGCCTGTAGTGTACGAATCTCAACTTTGAGTACCGAGTGATTTCCATCCAAATGCTTGGTGTAGTTGCAACGGAAGTTGTTTCAAAGCACGATTGTAAAAGGAGCGACCTTGCGAACAGTAATCAAAATATCATCATCACCCTATGAGAAGGGCCACTGAGGAGCACGGGACAAGCCAAGGTGAAGAGGGTTCCATTCACCTGCTGGTGAACTTCCAGTAGCGTGTCAATGGATTTGCCCATCCCTACAAGTTTAAGATCGGAAGGTGTGAAGTTCAGTGGGGCTACTTTGGACACATCCTCATAGCTCCACTTCAGATTTGTAATCCCAAATATCTAACCGGGGGTGATGAGATTCTATTTTGGTCTAATTGTAAATATTTGGGCTGCCACACGGAAAACAACTGGTTCTAAACCAGCTCAGTCGCATCTCATAGATGTGTGATAGCAGTTTTATAAACACTGTCAGTAAACTTCAGAGAAACTGACAACAATCAGATAATGTCATATTTACCTCAGCATTGAATTAAATGATTGCTCCCATGTTTAGATTGACTGGAAACCAGCAAACTAGACAGTCCTTGACCACCTATTTTTGGAGCCTCTGGTATAGCCTAAATTATACCTGATTGGGAGCATCCTCTTCAGCATATAAACAACCTGGTGCCTTACACACTCCGCATGCTTACACGCTGGCCTGGTGCTTTGGATCGCAGTTTGGCTTCTTTTTGTTAGTTTCCTCTCTCTTCCATTTTTGTGTCTCAGCCCCCTTTTGTGCTAGCGCACGACTCGTGGTGCTAAACGGGTTTGTTACAAACTCTTAAGAAAAATTTGGAGCAGAATTCTTAACTTTTTTTCTGCTACCTCCCATCTTTCCTAACTTCATTGCCATGCCCATTCCCCAGCCATCCAGGTATCGGCCTACATGTAAACATGGAAGGGGGTGGTCACCTAGATGCAAGATGATGCAGAAGAGTTGGCTCTTCACTGGCCAAGCGCATTAGCTGGGAGAGCAGGGGCTGATTGGGAACAtcggtagtcacctgaaatgatATACATTCTTGTTGGAAAGCCCCCCTTTGAAATGCTCGTTCTTTGGCTTGGGTAGTTATGTGTAAGTTGTAAGTCGCTCAATTAATGGGGAGCAACAagcatgtcttgttttgttttttgttttaccttttCAGCGTTATTCCACATTATTTGTAATTTTGGAATGTTTTCGCCCACAaaaaatatctattttttttctgtgcaacATTTCATCACTGTGTGCAATATCGTATGTGCCAATGGTGGCAATATATGTATATCAATTAAATATATGATTACTATTTGAAAGCATGTGACTGAATTCCATGTTTATTTCTCATGAAGGAGTTGTATGCCTTTATTTGCACTCAAATCTCCATCTTGGAGTAAAATATAGTAAACCAAGGTCTTAGCAGCCTGTTGGGTCAAGCAGTTCACATAGTACTTTAACTTGAAATAGAACAATGTCACTGCAAGTATGCCTCTCTTTAGGAAAGGGTAAACTTGGCGTATGGGTTGTTGAAGGTAGACTAAACACACGATGGAGTTTTTGTGAATaggaaaacttaaaaaaacagtgaaatctCCATTTTAGCTTTAAGCTAAGAAAAGGTGCTTCAGTCCAATTCTCATTAAAGTGTATGGTGAACTGTCTTCAGTGGTTGTTGTGTGTAGCACTTTGCTTTCCCAGGTTAATTAAATGCCTGACCAATacttgtttaaaatgatctCAAAAAAGAATGTCGTTAtctcttattttcttttctttttctttttttaaagatgaagtATTTGATTTGCTCATTTGGTTTTGAtgcattaaatataatttatgtacatttgacaaattaaaaataaataaatttaatttaccCAATGAGGGAAAATCTACAttcaaaatgtatgttttttctgtttcatttcttGTTCAAGAGAAAAAAACCTTCCCAAGATGTCTACAGATCACTGATGAAAAGTATGTTTGTTTAATTTTGATGTAGTGTTGTCCACAATGTCTGActctacatttacaatgatgCTAATTACTAAAGCTTAATTTTACAGCCTTTAAAATGCAAACTTTGCAATGGCAAGTTACTGATGACTCATGTCTACATTAGTAATGTATGTATAATACCAGGctgtaaaataaagcattacTTTGTTCTCTATTCA

Function

symbol description
pura Enables double-stranded telomeric DNA binding activity. Involved in DNA unwinding involved in DNA replication and negative regulation of transcription by RNA polymerase II. Located in nucleus. Implicated in autosomal dominant non-syndromic intellectual disability 31.

NR:

description
PREDICTED: transcriptional activator protein Pur-alpha-like

GO:

id name namespace
GO:0003690 double-stranded DNA binding molecular_function

KEGG:

id description
K21772 PURA; transcriptional activator protein Pur-alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778166.1 True 4475 mRNA 0.41 2 21562231 21571470

Neighbor

gene id symbol gene type direction distance location
slc22a6l LOC104936497,LOC103356784,LOC104961719 coding upstream 92203 21465243 ~ 21470028 (+)
pygma LOC104936496,LOC103356782,LOC102785324,LOC102293037,LOC102211029,LOC101481199 coding upstream 115239 21435673 ~ 21446992 (+)
zgc:165604 LOC103375428,LOC101483234,LOC100710403 coding upstream 295701 21260820 ~ 21266530 (+)
dlat dlat coding upstream 305331 21248857 ~ 21256900 (+)
LOC120544596 dixdc1 coding upstream 313998 21234771 ~ 21248233 (+)
gng8 LOC107669366,LOC107567170,LOC107715333 coding downstream 171727 21743197 ~ 21745734 (+)
tmem45b tmem45b coding downstream 174660 21746130 ~ 21751622 (+)
LOC120543655 ryr1,LOC103368261 coding downstream 199193 21770663 ~ 21821936 (+)
phldb2a LOC103368264 coding downstream 316301 21887771 ~ 21904548 (+)
lipia NA coding downstream 373925 21945395 ~ 21952073 (+)
G167384 LOC103356783 non-coding upstream 68962 21476203 ~ 21493269 (+)
G167376 NA non-coding upstream 103367 21458121 ~ 21458864 (+)
G167375 NA non-coding upstream 105790 21455487 ~ 21456441 (+)
G167374 NA non-coding upstream 111882 21450087 ~ 21450349 (+)
G167269 NA non-coding upstream 355364 21204762 ~ 21206867 (+)
G167444 NA non-coding downstream 150861 21722331 ~ 21724923 (+)
G167544 LOC103353342 non-coding downstream 349812 21921282 ~ 21923414 (+)
LOC120543580 NA non-coding downstream 359773 21931243 ~ 21933808 (+)
G167549 NA non-coding downstream 366219 21937689 ~ 21937949 (+)
G167557 NA non-coding downstream 404412 21975882 ~ 21977416 (+)
mia mia other upstream 358069 21202550 ~ 21204162 (+)
si:dkey-71l1.1 LOC101485670,LOC102299221,LOC103355094,LOC102789525,LOC104929928 other upstream 365194 21192051 ~ 21197037 (+)
layna layn,LOC100708261,LOC101467228,LOC104929931 other upstream 381479 21173994 ~ 21180752 (+)
dynll2b LOC107089378,LOC101174042,LOC103395122,LOC106514090,LOC107387006,LOC103140945 other upstream 593416 20966862 ~ 20968815 (+)
nle1 nle1 other upstream 739671 20815276 ~ 20822560 (+)
LOC120544432 NA other downstream 27613 21599083 ~ 21608848 (+)
LOC120544614 LOC103368254,LOC101478346,LOC103475446,LOC100706924,LOC104924602 other downstream 108663 21680133 ~ 21710377 (+)
dnajc18 dnajc18,LOC101477689,LOC100707186,LOC104924601 other downstream 142473 21713943 ~ 21720865 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other downstream 192731 21764201 ~ 21770754 (+)
sms sms other downstream 252183 21823653 ~ 21848098 (+)

Expression


Co-expression Network