G167269


Basic Information

Item Value
gene id G167269
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21204762 ~ 21206867 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU226695
GGTTTTTGCCAATGTGAAGGAATGATAAAGCTGTAACTCTTGCATCTACAAGCACATTATGCATTCACTCTCACATATCTTCACACACTCTTTCCTTAGCAGCTCAGAGGCCATGCTCCCCAGTGGAAAAGGAGCCCAGTGATAAACATCAGTTCCTCCCTCGTCCACTACGTCCCTACGGCTCATTCACCCTCCTTCTTTACACACACCTGGTCCCAAGTCCTTTGGTGGCTTTTTTTTTAGTGAACAATCTAAAAAATGACTGCATATGCCTCCAGAGAACTCCCTCCTCCTCACACATACTGAAACCAACACTATTCTAAAAGAATAAACAAAGCACAGTTGGCATCTTACTCATACACCCTCAGACAGTACTGTGTACTGTAGATGCAATTAAGTTTAACAATTTTAGTCTGTTACCATCTTCAGTGGACAATTTTGAGTTAGTCTTTACATTTCCACCCCCTTAAATTGACATTTTAGCATTTCCCTGTAAAACTAATAAGTGCTGCAAGTTAGTTTGAGTTCAAATAACAAATGTTTACAGTTTTGTCACTTAACTGCAGGGCCAGTAAAGACCTTATATAACATTCGGGGAATGCCTTTCAAACAATTATTACATGCCCTTAATGTGTCATTTACATACACAGAGGTGTGAATATTTTTAATCGGGATGTATGGGTTAAAGAGGGAGTTCTGTAGGCTTGTGATAGGGAAATTAACTCTCAGAAGTTCATTATCCTGCACCTCACCCTACTGTGTCTATACAACACTTTGTCATTACATAAGCTCCACGATTAGCCTTTAATTTCAAAGCACCATTGTCTTGCAGATACTTGGGAATAACAGTGAGTTAGGAATTAGATACTGGTGTGTTAGAAGGCACTTATAGACATCTAGACCTGTATGCCCTGCCTACTGCATGTGTACTAAACTGCCAACAAAACTGTTAacaggttaaaaataaaaacaggcagCATTTAGGATTAGTAGTGAAACAGTGTGAGGAGCGTCAGACTCTGCtctacattttctgttttgctgTTCCATCTTCACAGGAAACAGGAATAGGGCGCTCTGAGCCGGAAGATGACCGAGGTGCAGTGATTGTAAGGATACCATCAAATGACAGACTGGCGTTGACATCAGCACTTGACACTCCAGCAGGAAGCCTATATTTCCTCAGAAACTCTCTTGACACAAAGCCGTGGTCATCCTGTCTGCCCTCATGTTTGCCATGTACTGTGATGAACTCGTCACCGATATTGACAGACAGCTCTTCAGGTGAGAAAAACTTCACATCCACATGAATGATGTAGTGATCCTTTTCAATGCGCATCTCACTGTGTCCATTGTCGGGCCAGTTGAACCAGCGCATGAATGAAGGGCGTATCCAGGGGAAGGACCAGGGGAAGGGCCAGATTAGTGGCCAATCAGTGAGAGGTTCTGCCAAGGAGAGGTCAGAAAGTCGATGTGGAAAGGCCCGACGGTACCAGGGATACTGGATGGGGATATCCATGATGAGATTCCAGAGGAAATGTAAAAACGATGGGTATGAGGGAGGCGGATTCTTGGTTAGCCTGAGATTGGTGCTGCTGTGCTCTCCTGCACCACATTTATAGGCCTATTCCCCCCATCCCACCCGGTCTTTGTCTCT
>TU226697
GGTTTTTGCCAATGTGAAGGAATGATAAAGCTGTAACTCTTGCATCTACAAGCACATTATGCATTCACTCTCACATATCTTCACACACTCTTTCCTTAGCAGCTCAGAGGCCATGCTCCCCAGTGGAAAAGGAGCCCAGTGATAAACATCAGTTCCTCCCTCGTCCACTACGTCCCTACGGCTCATTCACCCTCCTTCTTTACACACACCTGGTCCCAAGTCCTTTGGTGGCTTTTTTTTTAGTGAACAATCTAAAAAATGACTGCATATGCCTCCAGAGAACTCCCTCCTCCTCACACATACTGAAACCAACACTATTCTAAAAGAATAAACAAAGCACAGTTGGCATCTTACTCATACACCCTCAGACAGTACTGTGTACTGTAGATGCAATTAAGTTTAACAATTTTAGTCTGTTACCATCTTCAGTGGACAATTTTGAGTTAGTCTTTACATTTCCACCCCCTTAAATTGACATTTTAGCATTTCCCTGTAAAACTAATAAGTGCTGCAAGTTAGTTTGAGTTCAAATAACAAATGTTTACAGTTTTGTCACTTAACTGCAGGGCCAGTAAAGACCTTATATAACATTCGGGGAATGCCTTTCAAACAATTATTACATGCCCTTAATGTGTCATTTACATACACAGAGGTGTGAATATTTTTAATCGGGATGTATGGGTTAAAGAGGGAGTTCTGTAGGCTTGTGATAGGGAAATTAACTCTCAGAAGTTCATTATCCTGCACCTCACCCTACTGTGTCTATACAACACTTTGTCATTACATAAGCTCCACGATTAGCCTTTAATTTCAAAGCACCATTGTCTTGCAGATACTTGGGAATAACAGTGAGTTAGGAATTAGATACTGGTGTGTTAGAAGGCACTTATAGACATCTAGACCTGTATGCCCTGCCTACTGCATGTGTACTAAACTGCCAACAAAACTGTTAacaggttaaaaataaaaacaggcagCATTTAGGATTAGTAGTGAAACAGTGTGAGGAGCGTCAGACTCTGCtctacattttctgttttgctgTTCCATCTTCACAGGAAACAGGAATAGGGCGCTCTGAGCCGGAAGATGACCGAGGTGCAGTGATTGTAAGGATACCATCAAATGACAGACTGGCGTTGACATCAGCACTTGACACTCCAGCAGGAAGCCTATATTTCCTCAGAAACTCTCTTGACACAAAGCCGTGGTCATCCTGTCTGCCCTCATGTTTGCCATGTACTGTGATGAACTCGTCACCGATATTGACAGACAGCTCTTCAGGTGAGAAAAACTTCACATCCACATGAATGATGTAGTGATCCTTTTCAATGCGCATCTATACAGACAATACAGCTGTTAGGAACAAATTCTGTTGCATGCCTGCAGCCTGGAGTCAGAGCTGGGCATGAAAAGACACAATAGCTTGTTATTGTCATCTCAGTGCAAGACTCATAGTGGCATCAGTGGAAGAGGA

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226695 True 1657 lncRNA 0.44 3 21204762 21206867
TU226697 False 1477 lncRNA 0.42 2 21204762 21206329

Neighbor

gene id symbol gene type direction distance location
LOC120543879 NA coding upstream 35128 21155565 ~ 21169634 (+)
LOC120544337 LOC102778915,LOC105355624,LOC106956155,LOC106921314,LOC103142148 coding upstream 60096 21122879 ~ 21144666 (+)
LOC120543552 LOC101467523,LOC105355624,LOC102778915,LOC106956155,LOC106921314,LOC103142148 coding upstream 86534 21110301 ~ 21118228 (+)
nectin1a LOC100707450,LOC102209168,LOC102791255,LOC102293356 coding upstream 98549 21088090 ~ 21106213 (+)
si:dkeyp-69c1.9 NA coding upstream 132734 21068672 ~ 21072028 (+)
LOC120544469 NA coding downstream 1023 21207890 ~ 21234080 (+)
LOC120544596 dixdc1 coding downstream 27904 21234771 ~ 21248233 (+)
dlat dlat coding downstream 41990 21248857 ~ 21256900 (+)
zgc:165604 LOC103375428,LOC101483234,LOC100710403 coding downstream 53953 21260820 ~ 21266530 (+)
pygma LOC104936496,LOC103356782,LOC102785324,LOC102293037,LOC102211029,LOC101481199 coding downstream 228806 21435673 ~ 21446992 (+)
G167199 NA non-coding upstream 150749 21052635 ~ 21054013 (+)
G167196 NA non-coding upstream 171362 21033196 ~ 21033400 (+)
G167195 NA non-coding upstream 172014 21032368 ~ 21032748 (+)
G167123 NA non-coding upstream 279355 20924596 ~ 20925407 (+)
LOC120543783 NA non-coding upstream 340655 20855736 ~ 20864107 (+)
G167374 NA non-coding downstream 243220 21450087 ~ 21450349 (+)
G167375 NA non-coding downstream 248620 21455487 ~ 21456441 (+)
G167376 NA non-coding downstream 251254 21458121 ~ 21458864 (+)
G167384 LOC103356783 non-coding downstream 269336 21476203 ~ 21493269 (+)
G167444 NA non-coding downstream 515464 21722331 ~ 21724923 (+)
mia mia other upstream 600 21202550 ~ 21204162 (+)
si:dkey-71l1.1 LOC101485670,LOC102299221,LOC103355094,LOC102789525,LOC104929928 other upstream 7725 21192051 ~ 21197037 (+)
layna layn,LOC100708261,LOC101467228,LOC104929931 other upstream 24010 21173994 ~ 21180752 (+)
dynll2b LOC107089378,LOC101174042,LOC103395122,LOC106514090,LOC107387006,LOC103140945 other upstream 235947 20966862 ~ 20968815 (+)
nle1 nle1 other upstream 382202 20815276 ~ 20822560 (+)
LOC120544432 NA other downstream 392216 21599083 ~ 21608848 (+)
LOC120544614 LOC103368254,LOC101478346,LOC103475446,LOC100706924,LOC104924602 other downstream 473266 21680133 ~ 21710377 (+)
dnajc18 dnajc18,LOC101477689,LOC100707186,LOC104924601 other downstream 507076 21713943 ~ 21720865 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other downstream 557334 21764201 ~ 21770754 (+)
sms sms other downstream 616786 21823653 ~ 21848098 (+)

Expression


Co-expression Network