si:dkeyp-69c1.9


Basic Information

Item Value
gene id si:dkeyp-69c1.9
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21068672 ~ 21072028 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777689.1
AAGGCTTATCTTAGCACTCATAGCTTGCTGAGAAGTGTCTCTATTTTTTGTCCCCCCTCAAATCAGCCCTACCATTACTTCAAAACCTTTCATACTGGACCACgtttcagctctctgttggTGGCCCAGCTGCTTTATTGACTCAGTTGGGGACTACTGTATCTATCACTCACTGGAGAAGAATTAAACACCATGACTACTTCAGTAAACAAGCTTTAAGTAGCTCTGTGTATAGccttacacacatacagacagtaCAGAGAAATGCAGACAGCATAGGGAAACACTGCAGAATTGTACCACAActtgtttttttctaaatgtaagCATTTGTTGTAGCAGACACCAAAAGCTTCAGAGCAGCTGGTGGTGCCAAGACCACAGCCAGGAGCCAGCAGACAAAATGTTCATCAAAAATGCCGACTTGCGAAATCCCCGCCACCACCATGAATTATTTCTGCGTAGTCGACCCTACAGGGGGGAACTGCCGACAGTGGCAGGATTTCTCCTCTACCCGGACACTCCTGCTAAGATGGAGACCACATCACAAGAAGCTTTCTGCTTCAGACCCGTCTCACAACATGACAGAGGCAAAGGAGACCATATCGCCCTGAACACACAGCAGGAGTCCCTCCGTTCTCATCCCACATCCTCGAGACAAACAGGAAGAGAAAACAGCAGCAGGGGCTGGAAACCAGGGGAGGACGATCAAGAAGGCAACCATGATCAGACAGCAGGGACAAACGAAAGAGATACGACAAAGATGCAGTCTCAGTATCAGAAGGACTTCCCTCCTCCGTCCTCCTGCTGCAGAAGGCGAACACCTGCCTTCCCACAGCCAGACAACATCGGCATCAACCCTGCCTTTAGGATCGACTTTAGCACAGTGCAAAGAGAGAATTACCCTGGTTGGCCCATCATGAGTCCCATGTGTGCTCGGAGGCTGAGAGCGGCCTCGACTGGGAAACcaaacatgaaaaaataaataaaagaatgtcAAAAATAAGTCAACTGCAGCAAATGTCTAATTTTATCAAATGTCTATCAACCCTAGCTTGTTATAATCATAGTTCA
>XM_039777690.1
TGTTATTTGAAATACAAAGTGTGATATTTGTAAGGCTTGCAACACTTTTTCTACTTTCTACAAATACTGAGTACACCAAACCTGTGGTAATTTTTTACAGCATTTGTTGTAGCAGACACCAAAAGCTTCAGAGCAGCTGGTGGTGCCAAGACCACAGCCAGGAGCCAGCAGACAAAATGTTCATCAAAAATGCCGACTTGCGAAATCCCCGCCACCACCATGAATTATTTCTGCGTAGTCGACCCTACAGGGGGGAACTGCCGACAGTGGCAGGATTTCTCCTCTACCCGGACACTCCTGCTAAGATGGAGACCACATCACAAGAAGCTTTCTGCTTCAGACCCGTCTCACAACATGACAGAGGCAAAGGAGACCATATCGCCCTGAACACACAGCAGGAGTCCCTCCGTTCTCATCCCACATCCTCGAGACAAACAGGAAGAGAAAACAGCAGCAGGGGCTGGAAACCAGGGGAGGACGATCAAGAAGGCAACCATGATCAGACAGCAGGGACAAACGAAAGAGATACGACAAAGATGCAGTCTCAGTATCAGAAGGACTTCCCTCCTCCGTCCTCCTGCTGCAGAAGGCGAACACCTGCCTTCCCACAGCCAGACAACATCGGCATCAACCCTGCCTTTAGGATCGACTTTAGCACAGTGCAAAGAGAGAATTACCCTGGTTGGCCCATCATGAGTCCCATGTGTGCTCGGAGGCTGAGAGCGGCCTCGACTGGGAAACcaaacatgaaaaaataaataaaagaatgtcAAAAATAAGTCAACTGCAGCAAATGTCTAATTTTATCAAATGTCTATCAACCCTAGCTTGTTATAATCATAGTTCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107551610

GO: NA

KEGG:

id description
ko04540 Gap junction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777689.1 True 1074 mRNA 0.47 5 21068672 21072028
XM_039777690.1 False 847 mRNA 0.47 4 21069054 21072028

Neighbor

gene id symbol gene type direction distance location
trpc6a LOC104964660,LOC103355104,LOC102206828 coding upstream 20219 21037107 ~ 21048453 (+)
angptl5 LOC103355105 coding upstream 43787 21019180 ~ 21024885 (+)
rpl23a rpl23a coding upstream 77134 20989008 ~ 20991538 (+)
LOC120544780 NA coding upstream 78177 20990424 ~ 20990495 (+)
ddx52 ddx52 coding upstream 80745 20981312 ~ 20987927 (+)
nectin1a LOC100707450,LOC102209168,LOC102791255,LOC102293356 coding downstream 16062 21088090 ~ 21106213 (+)
LOC120543552 LOC101467523,LOC105355624,LOC102778915,LOC106956155,LOC106921314,LOC103142148 coding downstream 38273 21110301 ~ 21118228 (+)
LOC120544337 LOC102778915,LOC105355624,LOC106956155,LOC106921314,LOC103142148 coding downstream 50851 21122879 ~ 21144666 (+)
LOC120543879 NA coding downstream 83537 21155565 ~ 21169634 (+)
LOC120544469 NA coding downstream 135862 21207890 ~ 21234080 (+)
G167199 NA non-coding upstream 14659 21052635 ~ 21054013 (+)
G167196 NA non-coding upstream 35272 21033196 ~ 21033400 (+)
G167195 NA non-coding upstream 35924 21032368 ~ 21032748 (+)
G167123 NA non-coding upstream 143265 20924596 ~ 20925407 (+)
LOC120543783 NA non-coding upstream 204565 20855736 ~ 20864107 (+)
G167269 NA non-coding downstream 132734 21204762 ~ 21206867 (+)
G167374 NA non-coding downstream 378059 21450087 ~ 21450349 (+)
G167375 NA non-coding downstream 383459 21455487 ~ 21456441 (+)
G167376 NA non-coding downstream 386093 21458121 ~ 21458864 (+)
G167384 LOC103356783 non-coding downstream 404175 21476203 ~ 21493269 (+)
dynll2b LOC107089378,LOC101174042,LOC103395122,LOC106514090,LOC107387006,LOC103140945 other upstream 99857 20966862 ~ 20968815 (+)
nle1 nle1 other upstream 246112 20815276 ~ 20822560 (+)
mtnr1bb LOC103354484,LOC100701643,LOC101479329,LOC101074288,LOC103475521,LOC107386965 other upstream 1046140 19988882 ~ 20022532 (+)
map3k7cl map3k7cl other upstream 1222619 19835353 ~ 19846053 (+)
grik1a LOC101481540,LOC100699029,LOC104923829,LOC102784741 other upstream 1237647 19801593 ~ 19831025 (+)
layna layn,LOC100708261,LOC101467228,LOC104929931 other downstream 101966 21173994 ~ 21180752 (+)
si:dkey-71l1.1 LOC101485670,LOC102299221,LOC103355094,LOC102789525,LOC104929928 other downstream 120023 21192051 ~ 21197037 (+)
mia mia other downstream 130522 21202550 ~ 21204162 (+)
LOC120544432 NA other downstream 527055 21599083 ~ 21608848 (+)
LOC120544614 LOC103368254,LOC101478346,LOC103475446,LOC100706924,LOC104924602 other downstream 608105 21680133 ~ 21710377 (+)

Expression


Co-expression Network