LOC120575707 (LOC104965991,LOC104935631,LOC100709878,LOC101470058)


Basic Information

Item Value
gene id LOC120575707
gene name LOC104965991,LOC104935631,LOC100709878,LOC101470058
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 22000565 ~ 22001935 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826536.1
CTGAAGCTGCTGTATCACTCATGTGACACAGCCAATGTATTCTGTGTTTCTAAATTCTTTGCCGGGGGATGAACTCCTGAGGAGCGAATGACGAAACAAATTTTGCTTTTATTCACATTCAGAGGATTAgtaaggaaagggaaaaaggggaaaaagagaaaatggcCAGTTTTATATTACGGAAAGCTGAACCCAACGATGTGTCCGATATCTTGCGACTCATAAAGGAACTTGCTAAATTTGAGGAGATGGAAGATAAGGTCATGCTGACCGAGAAAGATCTACTTAATGACGGATTTGGAGATCATCCATTCTACCACTGTTTAGTTGCTGAAGTCCCAAAAGAGCAGAGCTCAGAAGGGTACACTGTGATTGGCTTTGCCATGTACTACTTCACATATGACCCTTGGATTGGGAAGTTGCTCTACTTGGAAGACTTCTATGTCATGCAGGGGTTTCGTGGTTTGGGCATCGGTTCACAAATTCTGAAGGTTCTGAGTGAGACGGCAGTAAAGACTCGCTGTAGCAGCATGCACTTCATTGTAGCAGAAAACAACACAAAGTCTATTGAGTTCTACAAGCGAAGAGGAGCATCTGATCTGTCATCTGAAGAGGGCTGGCGTCTTTTTGAGATTGAAAAGGAGGATCTGCTGAAAATGACTGCCAAATAGAGTCTACTGTTTATTGAGTGCTGTTGGTGATAGCAATACTCATGTTTTGTTTGATTTGGCACAGTcttaataaatacaaaaaactgTTATCTTTGATAATAAATTGGTTCTGCTT

Function

NR:

description
PREDICTED: diamine acetyltransferase 1-like

GO: NA

KEGG:

id description
K00657 speG, SAT; diamine N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826536.1 True 786 mRNA 0.41 6 22000565 22001935

Neighbor

gene id symbol gene type direction distance location
prdx4 prdx4,LOC107386417,LOC102782956,LOC101470355,LOC108237004 coding upstream 2049 21995436 ~ 21998516 (+)
pdha1a pdha1,LOC103353336,LOC104965989,LOC102234273 coding upstream 6091 21985611 ~ 21994474 (+)
lipia NA coding upstream 48492 21945395 ~ 21952073 (+)
phldb2a LOC103368264 coding upstream 96017 21887771 ~ 21904548 (+)
LOC120543655 ryr1,LOC103368261 coding upstream 178629 21770663 ~ 21821936 (+)
LOC120544110 zfx,LOC101469595,LOC102299651,LOC100691538 coding downstream 873 22002808 ~ 22015678 (+)
gsx1 gsx1,LOC102779870 coding downstream 82033 22083968 ~ 22085457 (+)
zgc:175280 slc7a1,LOC102202414 coding downstream 126315 22128250 ~ 22133819 (+)
si:dkey-251i10.1 LOC104931197,LOC103353321,LOC101464643,LOC102200398 coding downstream 210922 22212857 ~ 22215288 (+)
LOC120544364 dlg4,LOC102775934,LOC101463677,LOC107386432,LOC107093504 coding downstream 263075 22265010 ~ 22333325 (+)
G167559 map7d2 non-coding upstream 18313 21981342 ~ 21982252 (+)
G167557 NA non-coding upstream 23149 21975882 ~ 21977416 (+)
G167549 NA non-coding upstream 62616 21937689 ~ 21937949 (+)
LOC120543580 NA non-coding upstream 66757 21931243 ~ 21933808 (+)
G167544 LOC103353342 non-coding upstream 77151 21921282 ~ 21923414 (+)
G167564 LOC104935632,LOC104965992,LOC103353333 non-coding downstream 14140 22016075 ~ 22017905 (+)
G167569 atp6v1a,LOC106526133,LOC108236878,LOC100710668,LOC101468244 non-coding downstream 28362 22030297 ~ 22031640 (+)
G167649 NA non-coding downstream 213598 22215533 ~ 22216464 (+)
G167651 NA non-coding downstream 216146 22218081 ~ 22227298 (+)
G167670 spag7 non-coding downstream 447935 22449870 ~ 22452122 (+)
sms sms other upstream 152467 21823653 ~ 21848098 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other upstream 229811 21764201 ~ 21770754 (+)
dnajc18 dnajc18,LOC101477689,LOC100707186,LOC104924601 other upstream 279700 21713943 ~ 21720865 (+)
LOC120544614 LOC103368254,LOC101478346,LOC103475446,LOC100706924,LOC104924602 other upstream 290188 21680133 ~ 21710377 (+)
LOC120544432 NA other upstream 391717 21599083 ~ 21608848 (+)
kif20a kif20a,LOC102778170 other downstream 132572 22134507 ~ 22144199 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other downstream 392581 22394516 ~ 22422054 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other downstream 619458 22621393 ~ 22645826 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other downstream 1839598 23841533 ~ 23918477 (+)
G168226 thoc2 other downstream 1925407 23927342 ~ 23928481 (+)

Expression


Co-expression Network