G180163



Basic Information


Item Value
gene id G180163
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34310611 ~ 34311279 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU244039
acagtctgacctgatcacattcatactggaagctgcccagtaccaccacagtctgacctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgaccacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgacctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgctgccactgagcagctccactggagcggttggggttaagggccttgctcaagggcacctcagtggtagTGATGAGGGAGTCcaggg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU244039 True 383 lncRNA 0.53 2 34310611 34311279

Neighbor


gene id symbol gene type direction distance location
LOC120545262 NA coding upstream 263987 33997411 ~ 34046624 (+)
LOC120545261 NA coding upstream 361360 33936243 ~ 33949251 (+)
LOC120545095 NA coding upstream 404449 33899181 ~ 33906162 (+)
LOC120545260 NA coding upstream 411554 33894650 ~ 33899057 (+)
LOC120545259 NA coding upstream 430952 33872512 ~ 33879659 (+)
wdr36 wdr36 coding downstream 21042 34332321 ~ 34355356 (+)
LOC120545317 NA coding downstream 260540 34571819 ~ 34948439 (+)
fktn fktn coding downstream 466575 34777854 ~ 34797178 (+)
si:ch211-202f5.2 NA coding downstream 539322 34850601 ~ 34851604 (+)
LOC120545265 man2a1 coding downstream 675391 34986670 ~ 35023782 (+)
G180160 NA non-coding upstream 14064 34294914 ~ 34296547 (+)
G180159 NA non-coding upstream 48433 34258173 ~ 34262178 (+)
LOC120545350 NA non-coding upstream 99126 34209549 ~ 34211485 (+)
LOC120545347 NA non-coding upstream 104757 34198447 ~ 34205854 (+)
G180128 NA non-coding upstream 146747 34163586 ~ 34163864 (+)
G180166 NA non-coding downstream 32014 34343293 ~ 34348784 (+)
G180174 NA non-coding downstream 160130 34471409 ~ 34473459 (+)
G180194 NA non-coding downstream 202467 34513746 ~ 34540775 (+)
G180197 NA non-coding downstream 231378 34542657 ~ 34544486 (+)
G180198 NA non-coding downstream 234047 34545326 ~ 34548922 (+)
slc31a1 slc31a1 other upstream 1817 34282844 ~ 34308794 (+)
G180043 NA other upstream 471224 33838192 ~ 33839387 (+)
G180040 NA other upstream 485273 33824342 ~ 33825338 (+)
dmtn LOC102797496,LOC102303313,LOC101469122,LOC102075582 other upstream 565418 33708725 ~ 33745193 (+)
G179997 LOC102306450 other upstream 986546 33270996 ~ 33324065 (+)
slc25a46 slc25a46,LOC102789456 other downstream 7314 34318593 ~ 34329263 (+)
G180199 NA other downstream 246303 34557582 ~ 34560385 (+)
G180201 NA other downstream 253601 34564880 ~ 34565952 (+)
G180213 fktn other downstream 405007 34716286 ~ 34803750 (+)
G180216 NA other downstream 495979 34807258 ~ 34814910 (+)

Expression



Co-expression Network